Strain Fitness in Pseudomonas putida KT2440 around PP_0984

Experiment: R2A with Fusaric 480 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 480 ug/mL
1,122,730	+				+0.2
1,122,730	+				-1.4
1,122,731	-				-0.4
1,122,821	-				+0.3
1,122,878	-				-0.0
1,122,878	-				+0.5
1,122,878	-				-0.7
1,122,919	+				+2.5
1,122,920	-				+0.6
1,122,920	-				+1.2
1,123,074	+		PP_0984	0.40	+0.9
1,123,074	+		PP_0984	0.40	+1.0
1,123,075	-		PP_0984	0.41	-1.5
1,123,147	-		PP_0984	0.55	+0.6
1,123,147	-		PP_0984	0.55	+2.1
1,123,152	-		PP_0984	0.56	+1.6
1,123,240	+		PP_0984	0.74	-0.5
1,123,279	-		PP_0984	0.82	+0.1
1,123,288	+		PP_0984	0.84	+0.4
1,123,289	-		PP_0984	0.84	+0.2
1,123,350	+				+1.1
1,123,350	+				+1.2
1,123,351	-				+0.7
1,123,392	+				+0.8
1,123,393	-				+1.0
1,123,393	-				-0.1
1,123,398	-				+1.4
1,123,669	+				-0.2
1,123,669	+				-1.6
1,123,669	+				+1.1
1,123,677	-				+0.9
1,123,702	+				+0.5
1,123,754	+				-0.3
1,123,776	-				+0.6
1,123,776	-				-0.0
1,123,880	+				+0.2
1,123,880	+				+0.8
1,123,962	+				-0.7
1,123,962	+				+0.2
1,123,986	-				-1.8
1,123,986	-				-0.3
1,123,986	-				+0.6
1,123,991	+				+2.3
1,123,991	+				+0.2
1,123,992	-				-0.3
1,124,031	+				-0.5
1,124,034	+				+1.9
1,124,034	+				+0.4
1,124,035	-				-1.0
1,124,035	-				-0.6
1,124,035	-				+0.3
1,124,035	-				-0.4
1,124,137	+		PP_0986	0.10	-0.7
1,124,138	-		PP_0986	0.10	+0.5
1,124,138	-		PP_0986	0.10	+0.6
1,124,138	-		PP_0986	0.10	+0.2
1,124,138	-		PP_0986	0.10	+0.7
1,124,140	-		PP_0986	0.11	-0.3
1,124,140	-		PP_0986	0.11	+0.0
1,124,248	+		PP_0986	0.20	+0.8