Strain Fitness in Pseudomonas putida KT2440 around PP_4173

Experiment: R2A with Fusaric 480 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 480 ug/mL
4,713,836	+				+0.5
4,713,837	-				+1.1
4,713,983	+		PP_4172	0.11	+1.2
4,713,984	-		PP_4172	0.11	+0.7
4,713,984	-		PP_4172	0.11	+0.9
4,713,984	-		PP_4172	0.11	+0.1
4,713,984	-		PP_4172	0.11	+1.0
4,714,270	+		PP_4172	0.43	+0.3
4,714,271	-		PP_4172	0.44	+1.0
4,714,307	-		PP_4172	0.48	+0.4
4,714,471	+		PP_4172	0.66	+0.2
4,714,471	+		PP_4172	0.66	+0.1
4,714,511	-		PP_4172	0.70	+0.5
4,714,511	-		PP_4172	0.70	+0.4
4,714,576	-		PP_4172	0.78	+0.7
4,714,580	-		PP_4172	0.78	+0.8
4,714,580	-		PP_4172	0.78	+1.3
4,714,580	-		PP_4172	0.78	+0.6
4,714,800	-				+0.8
4,714,873	+				+0.9
4,715,064	+		PP_4173	0.15	+1.2
4,715,205	+		PP_4173	0.23	+0.7
4,715,205	+		PP_4173	0.23	+1.2
4,715,205	+		PP_4173	0.23	+0.5
4,715,463	-		PP_4173	0.36	+0.6
4,715,674	-		PP_4173	0.47	+1.2
4,715,938	+		PP_4173	0.60	+0.9
4,716,124	-		PP_4173	0.70	+0.5
4,716,187	+		PP_4173	0.73	+0.9
4,716,188	-		PP_4173	0.73	+1.1
4,716,188	-		PP_4173	0.73	+1.2
4,716,290	-		PP_4173	0.79	+0.0
4,716,319	+		PP_4173	0.80	+0.5
4,716,320	-		PP_4173	0.80	+1.0
4,716,391	+		PP_4173	0.84	+0.2
4,716,391	+		PP_4173	0.84	+0.1
4,716,391	+		PP_4173	0.84	+0.4
4,716,391	+		PP_4173	0.84	+0.3
4,716,392	-		PP_4173	0.84	+1.3
4,716,392	-		PP_4173	0.84	+1.0
4,716,490	-		PP_4173	0.89	-0.5
4,716,490	-		PP_4173	0.89	+0.3
4,716,610	-				+0.2
4,716,820	+				+0.3