Strain Fitness in Pseudomonas putida KT2440 around PP_2157

Experiment: R2A with Fusaric 480 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 480 ug/mL
2,464,270	+				+0.9
2,464,345	+				+0.0
2,464,346	-				-0.5
2,464,443	-		PP_2157	0.12	-0.1
2,464,465	+		PP_2157	0.13	+0.9
2,464,465	+		PP_2157	0.13	+0.3
2,464,466	-		PP_2157	0.13	-0.2
2,464,605	+				-1.2
2,464,605	+		PP_2157	0.24	-0.3
2,464,605	+		PP_2157	0.24	+0.6
2,464,605	+		PP_2157	0.24	+1.2
2,464,605	+		PP_2157	0.24	+1.4
2,464,605	+		PP_2157	0.24	-0.4
2,464,606	-		PP_2157	0.24	-0.2
2,464,606	-		PP_2157	0.24	+1.3
2,464,606	-		PP_2157	0.24	-0.5
2,464,606	-		PP_2157	0.24	+1.2
2,464,679	+		PP_2157	0.29	-0.1
2,464,679	+		PP_2157	0.29	+0.6
2,464,679	+		PP_2157	0.29	-0.8
2,464,679	+		PP_2157	0.29	+0.9
2,464,680	-		PP_2157	0.29	-0.6
2,464,680	-		PP_2157	0.29	+0.7
2,464,902	+		PP_2157	0.46	+0.6
2,464,903	-		PP_2157	0.46	+1.0
2,464,906	+		PP_2157	0.46	-0.6
2,464,906	+		PP_2157	0.46	-0.1
2,464,906	+		PP_2157	0.46	+2.5
2,464,907	-		PP_2157	0.46	+0.7
2,464,907	-		PP_2157	0.46	+0.4
2,465,125	+		PP_2157	0.62	+0.9
2,465,126	-		PP_2157	0.62	+0.1
2,465,137	+		PP_2157	0.63	-0.4
2,465,659	+				-0.8
2,465,659	+				-0.4
2,465,660	-				-1.1
2,465,660	-				+0.9
2,466,022	+		PP_2158	0.57	-0.1
2,466,022	+		PP_2158	0.57	-0.1
2,466,272	-				-0.0
2,466,325	+				-1.0
2,466,344	+				-1.8
2,466,345	-				-1.3
2,466,345	-				-2.1
2,466,399	+				-0.9
2,466,439	+				-1.2
2,466,455	+				-0.6
2,466,456	-				-1.9
2,466,477	-				+0.1
2,466,500	-				+0.9
2,466,628	+		PP_2159	0.21	+0.5
2,466,628	+		PP_2159	0.21	-0.9