Strain Fitness in Pseudomonas putida KT2440 around PP_2161

Experiment: R2A with Fusaric 480 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 480 ug/mL
2,467,005	-				-2.2
2,467,078	+				+0.2
2,467,078	+				+0.2
2,467,098	+				-3.4
2,467,099	-				-0.8
2,467,156	+				-3.3
2,467,157	-				-0.4
2,467,168	+				-1.0
2,467,168	+				-3.5
2,467,169	-				-1.3
2,467,262	-		PP_2160	0.18	+0.5
2,467,262	-		PP_2160	0.18	-0.5
2,467,262	-		PP_2160	0.18	-1.4
2,467,433	+		PP_2160	0.39	+0.4
2,467,433	+		PP_2160	0.39	+0.8
2,467,433	+		PP_2160	0.39	-2.8
2,467,434	-		PP_2160	0.39	-3.3
2,467,434	-		PP_2160	0.39	+0.7
2,467,573	+		PP_2160	0.56	+0.9
2,467,573	+		PP_2160	0.56	-3.5
2,467,706	-		PP_2160	0.72	-2.2
2,467,745	-		PP_2160	0.76	-1.0
2,467,855	+		PP_2160	0.90	+0.3
2,467,856	-		PP_2160	0.90	+0.2
2,467,943	-				+0.2
2,467,943	-				+1.4
2,468,175	-		PP_2161	0.77	+0.8
2,468,312	+				+0.2
2,468,357	+				+1.2
2,468,358	-				-0.3
2,468,358	-				-0.7
2,468,358	-				+0.6
2,468,623	+		PP_2162	0.47	+0.1
2,468,894	-				+0.6
2,468,951	+				+0.6
2,469,027	+				-0.2
2,469,027	+				-0.4
2,469,027	+				+0.5
2,469,028	-				-1.2
2,469,055	+				-0.0
2,469,056	-				+0.7
2,469,056	-				+0.4
2,469,056	-				-1.1
2,469,058	-				-3.7
2,469,058	-				-1.1
2,469,071	+				-1.1
2,469,123	+				-3.6
2,469,123	+				-2.2
2,469,123	+				-2.0
2,469,123	+				-1.8
2,469,123	+				-0.2
2,469,124	-				-2.0
2,469,124	-				-2.2
2,469,124	-				-1.9
2,469,124	-				-3.7
2,469,124	-				-3.7
2,469,130	-				-3.3