Experiment: R2A with Fusaric 240 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
PP_5727: PP_5727 - protein of unknown function, at 5,974,781 to 5,975,056
_5727
Position (kb) 5974
5975
5976 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5973.864 kb on + strand at 5973.864 kb on + strand at 5973.918 kb on - strand at 5973.922 kb on - strand at 5973.951 kb on + strand at 5973.977 kb on + strand at 5973.997 kb on - strand at 5974.113 kb on - strand at 5974.196 kb on - strand at 5974.249 kb on + strand at 5974.249 kb on + strand at 5974.252 kb on + strand at 5974.252 kb on + strand at 5974.307 kb on + strand at 5974.307 kb on + strand at 5974.307 kb on + strand at 5974.308 kb on - strand at 5974.308 kb on - strand at 5974.361 kb on + strand at 5974.362 kb on - strand at 5974.383 kb on - strand at 5974.383 kb on - strand at 5974.404 kb on - strand at 5974.433 kb on - strand at 5974.557 kb on - strand at 5974.557 kb on - strand at 5974.606 kb on + strand at 5974.776 kb on - strand at 5974.878 kb on + strand, within PP_5727 at 5974.878 kb on + strand, within PP_5727 at 5974.879 kb on - strand, within PP_5727 at 5974.879 kb on - strand, within PP_5727 at 5974.879 kb on - strand, within PP_5727 at 5974.932 kb on + strand, within PP_5727 at 5974.933 kb on - strand, within PP_5727 at 5974.933 kb on - strand, within PP_5727 at 5974.937 kb on - strand, within PP_5727 at 5974.952 kb on - strand, within PP_5727 at 5974.953 kb on + strand, within PP_5727 at 5974.953 kb on + strand, within PP_5727 at 5974.954 kb on - strand, within PP_5727 at 5974.954 kb on - strand, within PP_5727 at 5974.954 kb on - strand, within PP_5727 at 5974.970 kb on + strand, within PP_5727 at 5974.970 kb on + strand, within PP_5727 at 5974.971 kb on - strand, within PP_5727 at 5975.051 kb on - strand at 5975.103 kb on + strand at 5975.114 kb on + strand at 5975.615 kb on + strand at 5975.678 kb on + strand at 5975.764 kb on + strand at 5975.764 kb on + strand at 5975.774 kb on + strand at 5975.774 kb on + strand at 5975.774 kb on + strand at 5975.775 kb on - strand at 5975.775 kb on - strand at 5975.919 kb on + strand at 5975.919 kb on + strand at 5975.921 kb on + strand at 5975.921 kb on + strand at 5975.922 kb on - strand at 5975.922 kb on - strand at 5975.922 kb on - strand at 5976.018 kb on - strand at 5976.024 kb on + strand at 5976.024 kb on + strand at 5976.025 kb on - strand at 5976.025 kb on - strand at 5976.025 kb on - strand at 5976.032 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Fusaric 240 ug/mL remove 5,973,864 + +0.7 5,973,864 + +0.3 5,973,918 - -0.2 5,973,922 - +0.9 5,973,951 + -0.1 5,973,977 + -0.9 5,973,997 - -2.9 5,974,113 - +0.8 5,974,196 - -0.0 5,974,249 + -0.7 5,974,249 + +0.9 5,974,252 + +2.0 5,974,252 + +0.0 5,974,307 + +0.6 5,974,307 + +0.9 5,974,307 + -0.9 5,974,308 - +0.8 5,974,308 - -0.9 5,974,361 + +0.2 5,974,362 - -0.1 5,974,383 - -1.1 5,974,383 - +0.3 5,974,404 - -1.2 5,974,433 - +0.4 5,974,557 - +0.6 5,974,557 - +1.1 5,974,606 + +0.2 5,974,776 - +1.6 5,974,878 + PP_5727 0.35 +0.0 5,974,878 + PP_5727 0.35 +1.2 5,974,879 - PP_5727 0.36 -0.3 5,974,879 - PP_5727 0.36 +1.2 5,974,879 - PP_5727 0.36 -4.2 5,974,932 + PP_5727 0.55 -0.8 5,974,933 - PP_5727 0.55 +1.4 5,974,933 - PP_5727 0.55 +0.6 5,974,937 - PP_5727 0.57 +0.8 5,974,952 - PP_5727 0.62 +1.6 5,974,953 + PP_5727 0.62 -1.4 5,974,953 + PP_5727 0.62 +1.9 5,974,954 - PP_5727 0.63 +0.2 5,974,954 - PP_5727 0.63 +1.0 5,974,954 - PP_5727 0.63 +0.4 5,974,970 + PP_5727 0.68 +1.7 5,974,970 + PP_5727 0.68 -3.2 5,974,971 - PP_5727 0.69 +0.5 5,975,051 - +0.2 5,975,103 + +0.3 5,975,114 + +0.7 5,975,615 + -1.4 5,975,678 + +1.1 5,975,764 + -0.5 5,975,764 + +1.1 5,975,774 + -0.9 5,975,774 + +0.7 5,975,774 + -0.5 5,975,775 - +0.2 5,975,775 - +0.3 5,975,919 + +0.0 5,975,919 + -0.1 5,975,921 + +0.3 5,975,921 + +1.2 5,975,922 - +0.2 5,975,922 - -1.7 5,975,922 - -0.4 5,976,018 - -0.7 5,976,024 + +0.7 5,976,024 + -1.9 5,976,025 - -3.3 5,976,025 - -0.1 5,976,025 - +1.5 5,976,032 - -3.1
Or see this region's nucleotide sequence