Strain Fitness in Pseudomonas putida KT2440 around PP_3449

Experiment: R2A with Fusaric 240 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 240 ug/mL
3,906,806	+		PP_3448	0.59	-1.4
3,906,806	+		PP_3448	0.59	+0.1
3,906,898	-		PP_3448	0.64	-0.8
3,906,898	-		PP_3448	0.64	-1.6
3,907,488	+				-2.8
3,907,813	+		PP_3449	0.29	-0.1
3,907,940	-		PP_3449	0.59	-2.0
3,907,971	-		PP_3449	0.66	-3.4
3,908,093	-				+0.4
3,908,109	+				+0.6
3,908,110	-				+1.1
3,908,110	-				+0.5
3,908,322	+		PP_3450	0.10	-0.5
3,908,322	+		PP_3450	0.10	+0.6
3,908,322	+		PP_3450	0.10	+0.5
3,908,322	+		PP_3450	0.10	-0.1
3,908,322	+		PP_3450	0.10	+0.3
3,908,323	-		PP_3450	0.10	-1.0
3,908,323	-		PP_3450	0.10	+0.6
3,908,323	-		PP_3450	0.10	+0.1
3,908,676	+		PP_3450	0.24	+1.5
3,908,701	-		PP_3450	0.25	-0.7
3,908,842	+		PP_3450	0.30	+1.2
3,908,842	+		PP_3450	0.30	+0.3
3,908,842	+		PP_3450	0.30	-0.8
3,908,843	-		PP_3450	0.30	+0.1
3,908,843	-		PP_3450	0.30	-0.7
3,908,856	+		PP_3450	0.30	-0.2
3,908,856	+		PP_3450	0.30	-1.8
3,908,894	-		PP_3450	0.32	+0.6