Strain Fitness in Pseudomonas putida KT2440 around PP_3379

Experiment: R2A with Fusaric 240 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 240 ug/mL
3,823,261	+				-2.5
3,823,262	-				+0.3
3,823,262	-				+0.8
3,823,931	-		PP_3378	0.73	-3.6
3,823,931	-		PP_3378	0.73	-3.9
3,824,408	+		PP_3379	0.29	-2.3
3,824,409	-		PP_3379	0.29	-2.9
3,825,142	+		PP_3380	0.11	-3.1
3,825,672	+		PP_3380	0.63	-1.7
3,825,672	+		PP_3380	0.63	+1.2
3,825,672	+		PP_3380	0.63	+0.5
3,825,672	+		PP_3380	0.63	-0.7
3,825,795	+		PP_3380	0.75	+0.5
3,825,954	+				+0.7
3,825,954	+				+1.4
3,825,955	-				-2.3