Strain Fitness in Pseudomonas putida KT2440 around PP_2717

Experiment: R2A with Fusaric 240 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 240 ug/mL
3,105,325	-		PP_2715	0.68	-1.8
3,105,414	+		PP_2715	0.80	+0.3
3,105,414	+		PP_2715	0.80	-0.4
3,105,454	+		PP_2715	0.86	-0.6
3,105,697	-		PP_2716	0.28	+1.2
3,105,697	-		PP_2716	0.28	+0.1
3,105,873	+		PP_2716	0.65	+0.2
3,105,874	-		PP_2716	0.66	-2.2
3,106,143	+				-0.8
3,106,143	+				+0.9
3,106,143	+				+0.1
3,106,144	-				+1.0
3,106,144	-				-1.9
3,106,147	-				-1.7
3,106,261	-		PP_2717	0.15	+0.0
3,106,277	+		PP_2717	0.17	-1.8
3,106,467	+		PP_2717	0.31	+0.9
3,106,479	+		PP_2717	0.32	+1.2
3,106,480	-		PP_2717	0.32	-2.5
3,106,480	-		PP_2717	0.32	+0.2
3,106,480	-		PP_2717	0.32	+1.6
3,106,731	+				+2.1
3,106,766	+		PP_2717	0.55	+1.1
3,107,034	-		PP_2717	0.76	-2.7
3,107,051	+		PP_2717	0.77	+1.3
3,107,202	-		PP_2717	0.89	+1.5
3,107,229	-				-0.0
3,107,229	-				-0.8
3,107,309	+				+1.4
3,107,309	+				+0.7
3,107,514	+		PP_2718	0.42	-0.0
3,107,515	-		PP_2718	0.42	+0.1
3,107,515	-		PP_2718	0.42	-2.8
3,107,768	-				+0.2
3,107,875	+				-0.7
3,107,875	+				+1.4
3,107,875	+				+0.4
3,107,876	-				-0.3
3,107,877	+				+0.8
3,107,878	-				+0.5
3,107,878	-				-1.7
3,107,941	+		PP_2719	0.37	+1.5
3,108,253	-		PP_2720	0.78	-1.0
3,108,337	-		PP_2721	0.16	-0.5