Strain Fitness in Pseudomonas putida KT2440 around PP_1605
Experiment: R2A with Fusaric 240 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with Fusaric 240 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,799,236 | - | +0.6 | |||
| 1,799,350 | + | PP_1605 | 0.23 | -2.8 | |
| 1,799,512 | + | PP_1605 | 0.49 | -1.8 | |
| 1,799,513 | - | PP_1605 | 0.49 | -0.2 | |
| 1,799,749 | + | PP_1605 | 0.87 | -2.7 | |
| 1,799,749 | + | PP_1605 | 0.87 | -2.3 | |
| 1,799,965 | + | +0.2 | |||
| 1,799,965 | + | +0.2 | |||
| 1,799,966 | - | +2.5 | |||
| 1,799,966 | - | +0.1 | |||
| 1,799,969 | + | +0.9 | |||
| 1,800,004 | + | -0.0 |
Or see this region's nucleotide sequence