Strain Fitness in Pseudomonas putida KT2440 around PP_0916

Experiment: R2A with Fusaric 240 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 240 ug/mL
1,058,157	+				-2.3
1,058,157	+				+0.4
1,058,182	+				+0.7
1,058,183	-				+0.7
1,058,996	-				+0.1
1,059,015	-				+0.4
1,059,015	-				+0.2
1,059,031	+				-0.7
1,059,031	+				+0.5
1,059,038	+				-1.6
1,059,038	+				-0.5
1,059,137	+				-0.1
1,059,138	-				-0.2
1,059,138	-				+0.6
1,059,138	-				+0.3
1,059,317	+		PP_0916	0.27	-1.8
1,059,318	-		PP_0916	0.27	+0.3
1,059,589	+		PP_0916	0.71	-0.7
1,059,590	-		PP_0916	0.71	-1.4
1,059,740	+				+0.7
1,059,741	-				+0.8
1,059,741	-				-0.1
1,060,003	+		PP_0917	0.17	-2.1
1,060,004	-		PP_0917	0.17	-0.7
1,060,045	+		PP_0917	0.21	+0.9
1,060,045	+		PP_0917	0.21	-0.8
1,060,046	-		PP_0917	0.21	+1.0
1,060,422	-		PP_0917	0.64	+0.4
1,060,467	+		PP_0917	0.69	+0.1
1,060,468	-		PP_0917	0.69	+0.1
1,060,486	+		PP_0917	0.71	-0.1
1,060,487	-		PP_0917	0.71	+1.0
1,060,654	-		PP_0917	0.90	-0.1
1,060,743	+				-1.0
1,060,743	+				-0.8
1,060,743	+				-0.6
1,060,743	+				-0.3
1,060,744	-				-0.2
1,060,744	-				+0.8