Strain Fitness in Pseudomonas putida KT2440 around PP_4202
Experiment: R2A with Fusaric 240 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Fusaric 240 ug/mL |
---|---|---|---|---|---|
remove | |||||
4,746,025 | + | +0.8 | |||
4,746,026 | - | +0.7 | |||
4,746,063 | + | +0.2 | |||
4,746,063 | + | -0.5 | |||
4,746,063 | + | -1.2 | |||
4,746,063 | + | -1.4 | |||
4,746,063 | + | -0.1 | |||
4,746,064 | - | +0.6 | |||
4,746,064 | - | -0.3 | |||
4,746,065 | + | +0.7 | |||
4,747,788 | - | -0.4 | |||
4,747,788 | - | -0.7 | |||
4,747,828 | - | -0.5 | |||
4,747,949 | - | +0.4 | |||
4,747,995 | - | -0.5 | |||
4,747,995 | - | +1.0 | |||
4,748,003 | - | +0.3 | |||
4,748,003 | - | -0.7 | |||
4,748,025 | - | -0.4 | |||
4,748,025 | - | +0.1 | |||
4,748,048 | - | -0.4 | |||
4,748,172 | + | +1.5 | |||
4,748,172 | + | +0.1 | |||
4,748,172 | + | +3.7 | |||
4,748,176 | + | -2.5 | |||
4,748,176 | + | -3.2 | |||
4,748,176 | + | -0.0 | |||
4,748,178 | + | +1.0 | |||
4,748,178 | + | -1.8 | |||
4,748,204 | + | +0.7 | |||
4,748,224 | + | +0.2 | |||
4,748,224 | + | +0.4 | |||
4,748,242 | + | -0.4 | |||
4,748,242 | + | +0.5 | |||
4,748,242 | + | +1.1 | |||
4,748,270 | + | +1.6 |
Or see this region's nucleotide sequence