Strain Fitness in Pseudomonas putida KT2440 around PP_2711

Experiment: R2A with Fusaric 240 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 240 ug/mL
3,100,396	+		PP_2709	0.80	-0.1
3,100,396	+		PP_2709	0.80	-1.0
3,100,396	+		PP_2709	0.80	-2.4
3,100,397	-		PP_2709	0.80	-0.2
3,100,525	+		PP_2709	0.89	+1.0
3,100,595	+				-2.7
3,100,595	+				-0.4
3,100,808	+		PP_2710	0.16	+0.7
3,100,808	+		PP_2710	0.16	+1.2
3,100,809	-		PP_2710	0.16	-0.5
3,100,832	+		PP_2710	0.19	-0.5
3,100,833	-		PP_2710	0.20	+1.1
3,100,925	+		PP_2710	0.33	-2.7
3,100,925	+		PP_2710	0.33	+0.2
3,100,926	-		PP_2710	0.33	+0.1
3,100,941	-		PP_2710	0.35	+0.8
3,100,941	-		PP_2710	0.35	+0.1
3,101,045	+		PP_2710	0.51	-0.9
3,101,189	+		PP_2710	0.72	+0.3
3,101,234	+		PP_2710	0.78	-1.6
3,101,235	-		PP_2710	0.79	+0.0
3,101,417	-				-1.9
3,101,417	-				+1.6
3,101,417	-				-1.5
3,101,480	+		PP_2711	0.14	-0.7
3,101,664	+		PP_2711	0.37	-0.5
3,101,665	-		PP_2711	0.37	-0.5
3,101,680	+		PP_2711	0.39	+0.5
3,101,680	+		PP_2711	0.39	-4.1
3,101,680	+		PP_2711	0.39	-0.4
3,101,681	-		PP_2711	0.39	-0.9
3,101,781	+		PP_2711	0.51	-0.4
3,101,896	-		PP_2711	0.66	-1.3
3,101,972	+		PP_2711	0.75	-1.2
3,102,040	-		PP_2711	0.83	+0.3
3,102,072	-		PP_2711	0.87	-1.6
3,102,138	+				-0.8
3,102,139	-				+0.5
3,102,141	-				-0.8
3,102,284	+		PP_2712	0.18	-1.8
3,102,518	+		PP_2712	0.54	+0.2
3,102,539	+		PP_2712	0.57	+0.2
3,102,540	-				+0.4
3,102,540	-		PP_2712	0.58	+0.7
3,102,644	+		PP_2712	0.74	+0.7
3,102,691	+		PP_2712	0.81	+0.7
3,103,105	+		PP_2713	0.44	+2.0
3,103,106	-		PP_2713	0.44	-0.0