Strain Fitness in Pseudomonas putida KT2440 around PP_1476

Experiment: R2A with Fusaric 240 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 240 ug/mL
1,680,148	-		PP_1475	0.46	-0.4
1,680,190	+		PP_1475	0.49	-4.1
1,680,190	+		PP_1475	0.49	-0.6
1,680,344	-		PP_1475	0.62	-0.4
1,680,344	-		PP_1475	0.62	-1.6
1,680,638	-		PP_1475	0.86	-2.0
1,680,767	+				-0.8
1,680,768	-				-1.3
1,680,893	-				+0.2
1,680,953	-				+0.5
1,681,069	+		PP_1476	0.25	-0.3
1,681,069	+		PP_1476	0.25	+0.4
1,681,070	-		PP_1476	0.26	-4.9
1,681,082	-		PP_1476	0.28	-0.6
1,681,250	-		PP_1476	0.59	-0.9
1,681,276	-		PP_1476	0.64	-1.4
1,681,369	-		PP_1476	0.81	-0.6
1,681,369	-		PP_1476	0.81	-1.6
1,681,402	-		PP_1476	0.87	-0.9
1,681,402	-				+1.6
1,681,620	+				+0.2
1,681,783	-		PP_1477	0.18	-0.1
1,681,783	-		PP_1477	0.18	-1.1
1,681,813	-		PP_1477	0.19	+0.5
1,682,058	+		PP_1477	0.34	+1.2
1,682,058	+		PP_1477	0.34	+1.0
1,682,058	+		PP_1477	0.34	-2.2
1,682,059	-		PP_1477	0.34	+0.8
1,682,059	-		PP_1477	0.34	-3.8
1,682,059	-		PP_1477	0.34	-0.7
1,682,104	-		PP_1477	0.36	-2.2