Strain Fitness in Pseudomonas putida KT2440 around PP_2806

Experiment: R2A with Fusaric 240 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 240 ug/mL
3,198,001	+		PP_2805	0.57	+1.7
3,198,001	+		PP_2805	0.57	+0.7
3,198,001	+		PP_2805	0.57	-0.6
3,198,002	-		PP_2805	0.57	-1.2
3,198,002	-		PP_2805	0.57	+0.7
3,198,002	-		PP_2805	0.57	+0.4
3,198,112	+		PP_2805	0.64	-1.0
3,198,113	-		PP_2805	0.64	+0.7
3,198,203	-		PP_2805	0.70	+1.4
3,198,208	+		PP_2805	0.71	-0.5
3,198,208	+		PP_2805	0.71	-0.5
3,198,208	+		PP_2805	0.71	-0.1
3,198,209	-		PP_2805	0.71	+0.3
3,198,211	+		PP_2805	0.71	-0.2
3,198,457	+		PP_2805	0.87	+0.0
3,198,666	+				-0.0
3,198,666	+				+0.6
3,198,666	+				+1.7
3,198,666	+				-0.0
3,198,677	+				+0.2
3,198,677	+				+0.5
3,198,678	-				-0.3
3,198,767	+				+0.0
3,198,829	-				-0.1
3,198,829	-				-0.6
3,198,832	+				-0.3
3,198,832	+				+0.8
3,198,832	+				+0.1
3,198,938	-				-1.0
3,199,064	+		PP_2806	0.23	+0.6
3,199,064	+		PP_2806	0.23	-0.2
3,199,145	-		PP_2806	0.36	-1.3
3,199,145	-				+0.9
3,199,145	-		PP_2806	0.36	+0.1
3,199,346	-		PP_2806	0.71	-0.9
3,199,346	-		PP_2806	0.71	-0.6
3,199,346	-		PP_2806	0.71	-0.3
3,199,375	+		PP_2806	0.76	-1.9
3,199,375	+		PP_2806	0.76	+0.4
3,199,375	+		PP_2806	0.76	-1.1
3,199,375	+		PP_2806	0.76	-1.5
3,199,376	-		PP_2806	0.76	-0.6
3,199,643	+				-1.3
3,199,756	-				-0.2
3,199,771	-				+0.3
3,199,909	+		PP_2807	0.16	+0.9
3,199,909	+		PP_2807	0.16	-2.4
3,199,910	-		PP_2807	0.16	-0.5
3,199,943	-		PP_2807	0.20	-3.6
3,199,943	-		PP_2807	0.20	+0.7
3,200,061	+		PP_2807	0.33	+0.2
3,200,106	+		PP_2807	0.38	-1.0
3,200,106	+		PP_2807	0.38	-0.2
3,200,207	-		PP_2807	0.50	+0.1
3,200,207	-		PP_2807	0.50	-1.4
3,200,386	+		PP_2807	0.70	-0.9
3,200,443	+		PP_2807	0.76	-0.0
3,200,443	+		PP_2807	0.76	+0.4
3,200,444	-		PP_2807	0.76	-0.3