Strain Fitness in Pseudomonas putida KT2440 around PP_1694

Experiment: R2A with Fusaric 240 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 240 ug/mL
1,884,427	+				+0.0
1,884,427	+				+0.2
1,884,427	+				+2.0
1,884,428	-				-0.3
1,884,428	-				+0.1
1,884,579	+				+0.5
1,884,580	-				+0.2
1,884,601	+				-0.4
1,884,601	+				+0.3
1,884,860	+		PP_1692	0.58	-2.0
1,884,861	-		PP_1692	0.58	-1.1
1,884,862	+		PP_1692	0.58	-0.6
1,884,862	+		PP_1692	0.58	+0.3
1,884,863	-		PP_1692	0.58	-0.6
1,885,099	-				-1.0
1,885,122	-				-0.3
1,885,219	+				+0.2
1,885,219	+				-0.4
1,885,219	+				-0.4
1,885,220	-				-0.8
1,885,220	-				+0.6
1,885,294	+				-0.3
1,885,294	+				-1.1
1,885,383	+				-0.4
1,885,383	+				+0.5
1,885,384	-				+0.8
1,885,926	-		PP_1694	0.40	-0.0
1,886,053	+		PP_1694	0.48	-0.6
1,886,054	-		PP_1694	0.48	-0.7
1,886,069	-		PP_1694	0.49	-1.3
1,886,117	+		PP_1694	0.53	-0.7
1,886,234	+		PP_1694	0.60	-3.9
1,886,328	-		PP_1694	0.67	-1.7
1,886,328	-		PP_1694	0.67	+1.5
1,886,467	+		PP_1694	0.76	-1.4
1,886,468	-		PP_1694	0.76	-1.0
1,886,639	+		PP_1694	0.88	+0.6
1,886,639	+		PP_1694	0.88	-1.8
1,886,640	-		PP_1694	0.88	-0.7
1,886,704	+				+1.0
1,886,704	+				-0.3
1,886,704	+				-2.5
1,886,787	+				-2.7
1,886,863	+				-0.0
1,886,864	-				-2.8
1,886,884	-				-0.2
1,886,926	-				-3.1
1,887,004	+				+0.3
1,887,005	-				+0.5
1,887,005	-				-0.0
1,887,150	+		PP_1695	0.10	+0.8
1,887,150	+		PP_1695	0.10	+1.4
1,887,337	-		PP_1695	0.16	+1.2
1,887,537	+		PP_1695	0.21	-1.4
1,887,762	+		PP_1695	0.28	-1.2
1,887,763	-		PP_1695	0.28	+0.8
1,887,763	-		PP_1695	0.28	+0.2