Strain Fitness in Pseudomonas putida KT2440 around PP_3227

Experiment: R2A with Fusaric 120 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 120 ug/mL
3,662,088	+		PP_3226	0.35	-1.4
3,662,089	-		PP_3226	0.35	-1.4
3,662,089	-		PP_3226	0.35	-0.9
3,662,091	-		PP_3226	0.35	-0.2
3,662,121	-		PP_3226	0.38	-0.5
3,662,343	+		PP_3226	0.57	-0.6
3,662,373	+		PP_3226	0.60	+2.3
3,662,577	+		PP_3226	0.78	+0.0
3,662,578	-		PP_3226	0.78	+0.2
3,662,685	-		PP_3226	0.87	+0.3
3,662,856	+				+0.7
3,662,901	+				+1.0
3,663,087	-				-0.3
3,663,136	-		PP_3227	0.13	-1.3
3,663,142	+		PP_3227	0.14	-1.5
3,663,143	-		PP_3227	0.14	-1.2
3,663,143	-		PP_3227	0.14	-0.1
3,663,176	-				-0.7
3,663,176	-		PP_3227	0.18	+0.1
3,663,351	-				+1.7
3,663,368	+		PP_3227	0.39	-0.2
3,663,894	+				-1.1
3,663,971	+				+0.3
3,663,992	-				-1.2
3,664,215	+		PP_3228	0.11	+0.7
3,664,264	+				+0.9
3,664,423	+		PP_3228	0.32	+0.1
3,664,789	+		PP_3228	0.70	+1.1
3,664,790	-		PP_3228	0.70	-0.4
3,664,839	+		PP_3228	0.75	-0.1
3,664,844	-		PP_3228	0.76	+0.1