Strain Fitness in Pseudomonas putida KT2440 around PP_3100

Experiment: R2A with Fusaric 120 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 120 ug/mL
3,495,375	+		PP_3099	0.44	-0.9
3,495,448	-		PP_3099	0.49	-3.2
3,495,531	+		PP_3099	0.55	-0.6
3,495,531	+		PP_3099	0.55	+0.4
3,495,675	+		PP_3099	0.64	+0.5
3,495,675	+		PP_3099	0.64	+0.1
3,495,675	+		PP_3099	0.64	+2.1
3,495,675	+				+1.7
3,495,676	-		PP_3099	0.64	+0.2
3,495,676	-		PP_3099	0.64	-0.4
3,495,676	-		PP_3099	0.64	-0.9
3,495,676	-				+0.7
3,495,676	-		PP_3099	0.64	-0.4
3,495,750	+		PP_3099	0.69	+0.7
3,495,762	+		PP_3099	0.70	-0.0
3,495,819	-		PP_3099	0.74	-2.8
3,496,578	-		PP_3100	0.61	-0.9
3,496,701	-		PP_3100	0.82	-0.7
3,496,707	+		PP_3100	0.83	-0.9
3,496,707	+		PP_3100	0.83	-0.9
3,496,708	-		PP_3100	0.83	-0.1
3,496,833	+				+0.3
3,497,101	-		PP_5562	0.35	-0.3
3,497,101	-		PP_5562	0.35	+1.0
3,497,101	-		PP_5562	0.35	+0.6
3,497,116	-		PP_5562	0.37	+1.3
3,497,133	+		PP_5562	0.39	-1.0
3,497,319	-		PP_5562	0.64	-1.2
3,497,319	-		PP_5562	0.64	+0.2
3,497,370	+		PP_5562	0.70	+0.0
3,497,370	+		PP_5562	0.70	+0.2
3,497,371	-		PP_5562	0.70	-0.4
3,497,440	-		PP_5562	0.79	+0.9
3,497,490	+		PP_5562	0.86	-2.1
3,497,679	+				-1.1
3,497,679	+				-0.0
3,497,679	+				-1.0
3,497,680	-				-1.5
3,497,685	+				-2.4
3,497,685	+				-1.4
3,497,685	+				-0.9
3,497,685	+				+1.8
3,497,686	-				+0.0
3,497,686	-				-0.7
3,497,686	-				-0.2
3,497,686	-				+0.6
3,497,686	-				-0.7
3,497,686	-				-2.5