Strain Fitness in Pseudomonas putida KT2440 around PP_1654

Experiment: R2A with Fusaric 120 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 120 ug/mL
1,848,385	+				+0.1
1,848,520	+				-1.8
1,848,521	-				+0.3
1,848,525	+				-0.6
1,848,526	-				-2.4
1,848,526	-				+0.0
1,848,554	+				-0.6
1,848,555	-				-0.4
1,848,555	-				-1.3
1,848,602	-				-2.6
1,848,647	-				-1.6
1,848,647	-				-2.4
1,848,670	+		PP_1654	0.12	-1.1
1,848,671	-		PP_1654	0.12	-0.6
1,848,887	+		PP_1654	0.36	-1.4
1,848,888	-		PP_1654	0.36	-2.5
1,849,023	-		PP_1654	0.51	-2.1
1,849,023	-		PP_1654	0.51	+0.3
1,849,023	-		PP_1654	0.51	-0.9
1,849,103	-		PP_1654	0.60	-0.6
1,849,125	-		PP_1654	0.63	-2.0
1,849,218	-		PP_1654	0.73	-2.2
1,849,428	-				-1.2
1,849,458	-				+0.0
1,849,607	-		PP_1655	0.11	-0.4
1,849,607	-		PP_1655	0.11	+1.0
1,850,014	-		PP_1655	0.41	+0.3
1,850,014	-		PP_1655	0.41	+0.8