Strain Fitness in Pseudomonas putida KT2440 around PP_2756

Experiment: R2A with Fusaric 120 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 120 ug/mL
3,139,705	+		PP_2755	0.21	-0.1
3,139,705	+		PP_2755	0.21	-0.9
3,139,705	+		PP_2755	0.21	-0.1
3,139,705	+		PP_2755	0.21	-0.3
3,139,705	+		PP_2755	0.21	-1.1
3,139,705	+		PP_2755	0.21	-0.4
3,139,705	+		PP_2755	0.21	+1.2
3,139,705	+		PP_2755	0.21	-0.8
3,139,706	-		PP_2755	0.21	+0.7
3,139,706	-		PP_2755	0.21	-0.3
3,139,706	-		PP_2755	0.21	+0.3
3,139,706	-				-0.2
3,139,706	-		PP_2755	0.21	+0.1
3,139,706	-		PP_2755	0.21	-2.5
3,139,706	-		PP_2755	0.21	+0.1
3,139,837	+		PP_2755	0.31	+0.6
3,140,106	+		PP_2755	0.53	+0.8
3,140,106	+		PP_2755	0.53	-0.3
3,140,107	-		PP_2755	0.53	+0.5
3,140,107	-		PP_2755	0.53	-0.2
3,140,179	+		PP_2755	0.59	-0.5
3,140,507	+		PP_2755	0.85	+0.5
3,140,842	-		PP_2756	0.36	+0.1
3,141,040	+		PP_2756	0.88	+1.6
3,141,041	-		PP_2756	0.88	+0.2
3,141,222	+		PP_2757	0.14	-0.4
3,141,222	+		PP_2757	0.14	+0.2
3,141,222	+		PP_2757	0.14	-0.2
3,141,364	+		PP_2757	0.29	+0.1
3,141,573	+		PP_2757	0.50	-0.2
3,141,573	+		PP_2757	0.50	+0.8
3,141,574	-		PP_2757	0.50	+0.0
3,141,620	-		PP_2757	0.55	+0.2
3,141,620	-		PP_2757	0.55	+0.5
3,141,828	+		PP_2757	0.77	+0.0
3,141,828	+		PP_2757	0.77	-0.2
3,141,828	+		PP_2757	0.77	+0.0
3,141,828	+		PP_2757	0.77	-0.3
3,141,829	-		PP_2757	0.77	+0.7