Strain Fitness in Pseudomonas putida KT2440 around PP_5604

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,930,140	+		PP_5603	0.25	-2.1
3,930,243	+		PP_5603	0.33	-1.6
3,930,243	+		PP_5603	0.33	-0.4
3,930,243	+		PP_5603	0.33	+0.4
3,930,244	-		PP_5603	0.33	-2.0
3,930,244	-		PP_5603	0.33	+0.1
3,930,473	+		PP_5603	0.51	-0.5
3,930,474	-		PP_5603	0.51	-2.4
3,931,272	+		PP_5604	0.25	+1.4
3,931,272	+		PP_5604	0.25	-1.2
3,931,362	+		PP_5604	0.39	-0.7
3,932,156	-		PP_3466	0.23	-0.9
3,932,293	+		PP_3466	0.31	-0.6
3,932,294	-		PP_3466	0.31	+0.6
3,932,493	+		PP_3466	0.42	-0.7
3,932,493	+		PP_3466	0.42	-1.6
3,932,494	-		PP_3466	0.43	-1.0
3,932,494	-		PP_3466	0.43	+1.1
3,932,494	-		PP_3466	0.43	+2.1
3,932,494	-		PP_3466	0.43	-0.7
3,932,563	+		PP_3466	0.47	+0.9
3,932,564	-		PP_3466	0.47	-1.3
3,932,608	+		PP_3466	0.49	+0.1
3,932,608	+		PP_3466	0.49	-1.2
3,932,608	+		PP_3466	0.49	+0.2
3,932,609	-		PP_3466	0.49	+0.7
3,932,609	-		PP_3466	0.49	+0.4
3,932,609	-		PP_3466	0.49	-1.9
3,932,609	-		PP_3466	0.49	-2.4
3,932,767	+		PP_3466	0.58	-1.4
3,932,768	-		PP_3466	0.59	-2.3
3,932,768	-		PP_3466	0.59	-1.1