Strain Fitness in Pseudomonas putida KT2440 around PP_2692

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,081,692	+		PP_2691	0.52	-0.2
3,081,775	+		PP_2691	0.57	+1.7
3,081,975	-		PP_2691	0.69	-0.3
3,081,982	+		PP_2691	0.69	-2.0
3,082,794	-		PP_2692	0.18	-1.0
3,082,827	-		PP_2692	0.20	-1.7
3,083,029	-		PP_2692	0.33	+0.3
3,083,050	-		PP_2692	0.34	-1.8
3,083,070	+		PP_2692	0.36	-1.5
3,083,283	-		PP_2692	0.49	-1.4
3,083,283	-		PP_2692	0.49	+0.5
3,083,290	-		PP_2692	0.50	-0.5
3,083,332	+		PP_2692	0.53	-1.4
3,083,332	+		PP_2692	0.53	+1.3
3,083,529	+		PP_2692	0.65	+0.4
3,083,529	+		PP_2692	0.65	-1.0
3,083,801	+		PP_2692	0.83	-0.4
3,083,801	+		PP_2692	0.83	-0.5
3,083,802	-		PP_2692	0.83	-1.4
3,083,872	-		PP_2692	0.87	-1.1
3,084,307	+		PP_2693	0.19	-1.9
3,084,308	-		PP_2693	0.19	-0.4
3,084,737	-		PP_2693	0.62	-0.1
3,084,769	+		PP_2693	0.65	+0.5
3,084,867	-		PP_2693	0.75	-1.9
3,085,053	+				+1.1
3,085,054	-				-1.0
3,085,054	-				+2.0
3,085,055	+				+0.1
3,085,056	-				+1.2