Strain Fitness in Pseudomonas putida KT2440 around PP_2631

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,009,782	+				-0.4
3,010,154	+				-1.2
3,010,155	-				-0.9
3,010,239	+				-1.9
3,010,239	+				-1.0
3,010,239	+				+2.1
3,010,240	-				+0.5
3,010,467	+				+2.5
3,010,612	-				-3.2
3,010,662	+				+0.1
3,010,832	+		PP_2631	0.38	-0.5
3,010,907	+		PP_2631	0.78	-1.8
3,010,945	+				-1.4
3,010,948	+				+0.6
3,010,948	+				+0.2
3,010,948	+				+1.3
3,010,949	-				+1.4
3,010,949	-				+0.8
3,011,120	-		PP_2632	0.11	-0.5
3,011,315	+		PP_2632	0.23	+1.7
3,011,315	+		PP_2632	0.23	-0.2
3,011,319	+		PP_2632	0.23	+0.7
3,011,320	-		PP_2632	0.24	+1.3
3,011,575	-		PP_2632	0.39	-3.1
3,011,575	-		PP_2632	0.39	-1.3
3,011,687	+		PP_2632	0.46	+0.4