Strain Fitness in Pseudomonas putida KT2440 around PP_0152

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
160,140	+		PP_0149	0.87	-1.8
160,140	+		PP_0149	0.87	-0.8
160,159	+		PP_0149	0.88	-1.3
160,274	+				+1.1
160,275	-				-0.6
160,397	+				-0.2
160,413	-				-0.6
160,459	+		PP_0150	0.23	-2.2
160,460	-		PP_0150	0.23	+1.0
160,460	-		PP_0150	0.23	-0.1
160,481	+		PP_0150	0.30	-0.6
160,739	+				+0.5
160,739	+				+0.8
160,740	-				-0.5
160,740	-				+2.1
160,740	-				-1.0
160,740	-				+0.6
160,740	-				-0.5
160,743	+				+0.4
160,743	+				-0.0
160,744	-				-0.6
160,744	-				+0.4
160,808	+		PP_0151	0.22	+1.2
160,809	-		PP_0151	0.23	-0.4
160,894	+		PP_0151	0.52	-0.7
160,894	+		PP_0151	0.52	+0.4
160,894	+		PP_0151	0.52	-0.2
160,941	+		PP_0151	0.68	+1.7
160,942	-		PP_0151	0.68	-0.0
161,029	-				+0.1
161,351	-		PP_0152	0.59	-1.7
161,433	+		PP_0152	0.81	-1.0
161,434	-		PP_0152	0.81	-0.6
161,481	-				-0.8
161,529	+				+0.5
161,568	+				-0.5
161,858	+		PP_0153	0.50	+0.1
161,858	+		PP_0153	0.50	+0.4
161,859	-		PP_0153	0.50	-0.7
161,957	+				-2.6
161,958	-				-0.3
161,958	-				-1.5
161,997	+				+0.0
161,998	-				+0.4
162,001	+				-0.4
162,001	+				+0.4
162,002	-				+0.3
162,049	-				-0.3
162,052	+				+0.5
162,053	-				+0.2
162,082	+				+1.1
162,207	-				-0.9
162,241	-				-1.1
162,246	+				+0.6
162,246	+				-1.6
162,246	+				-1.3
162,247	-				-1.2
162,264	-				+0.4
162,447	-				+1.3
162,468	-				-0.3