Strain Fitness in Pseudomonas putida KT2440 around PP_3380

Experiment: R2A with Polymyxin B sulfate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.001 mg/ml
3,824,408	+		PP_3379	0.29	-2.2
3,824,409	-		PP_3379	0.29	+1.1
3,825,142	+		PP_3380	0.11	-1.4
3,825,672	+		PP_3380	0.63	-0.9
3,825,672	+		PP_3380	0.63	-1.2
3,825,672	+		PP_3380	0.63	+1.3
3,825,672	+		PP_3380	0.63	-0.9
3,825,795	+		PP_3380	0.75	-2.7
3,825,954	+				-2.1
3,825,954	+				+0.0
3,825,955	-				+0.2
3,826,025	-				-1.4
3,826,056	+				+0.6
3,826,057	-				-0.9
3,826,068	-				-0.2
3,826,169	-				-0.2
3,826,279	-				+0.5