Strain Fitness in Pseudomonas putida KT2440 around PP_3307

Experiment: R2A with Polymyxin B sulfate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.001 mg/ml
3,741,728	-		PP_3305	0.79	+0.5
3,741,755	+		PP_3305	0.82	-0.4
3,741,763	+		PP_3305	0.83	-0.5
3,741,828	+		PP_3305	0.89	+1.0
3,741,891	-				-0.6
3,741,908	-				-2.3
3,741,914	-				-1.8
3,741,917	+				+0.8
3,741,918	-				+0.6
3,741,921	-				+0.4
3,741,946	-				+0.7
3,741,946	-				-0.5
3,741,946	-				-0.3
3,741,953	+				+1.4
3,741,966	-				+0.6
3,741,966	-				-0.2
3,741,985	-				-0.4
3,742,037	+				+0.9
3,742,151	+				+0.8
3,742,152	-				-0.7
3,742,254	+				-0.1
3,742,254	+				-0.1
3,742,255	-				+1.4
3,742,255	-				+0.2
3,742,305	+				+0.2
3,742,306	-				+0.3
3,742,310	+				-1.7
3,742,346	+				+0.6
3,742,560	+				+0.5
3,742,698	-				+0.2
3,742,698	-				+0.2
3,742,698	-				-0.1
3,742,725	+				+0.3
3,742,725	+				+0.1
3,742,725	+				-0.7
3,742,726	-				+0.0
3,742,726	-				+0.3
3,742,771	-				+0.1
3,742,995	-		PP_3307	0.77	+0.3
3,742,995	-		PP_3307	0.77	+1.0
3,743,189	+				+0.0
3,743,189	+				+0.1
3,743,580	+		PP_3308	0.73	-0.3
3,743,637	+		PP_3308	0.84	-0.1
3,743,637	+		PP_3308	0.84	+0.3
3,743,638	-		PP_3308	0.84	+0.1
3,743,639	+		PP_3308	0.84	-0.6
3,743,639	+		PP_3308	0.84	+0.2
3,743,639	+		PP_3308	0.84	+0.6
3,743,639	+		PP_3308	0.84	+0.7
3,743,639	+		PP_3308	0.84	+0.5
3,743,639	+		PP_3308	0.84	+0.2
3,743,639	+		PP_3308	0.84	-1.1
3,743,639	+		PP_3308	0.84	+0.1
3,743,639	+		PP_3308	0.84	-1.3
3,743,639	+		PP_3308	0.84	+0.2
3,743,639	+		PP_3308	0.84	-0.1
3,743,639	+		PP_3308	0.84	-1.5
3,743,640	-		PP_3308	0.85	+0.3
3,743,640	-		PP_3308	0.85	+0.5
3,743,640	-		PP_3308	0.85	-0.6
3,743,640	-		PP_3308	0.85	+0.4
3,743,640	-		PP_3308	0.85	+0.1
3,743,972	+		PP_3309	0.25	-0.1
3,744,058	+		PP_3309	0.34	-0.9
3,744,059	-		PP_3309	0.34	+0.4
3,744,068	+		PP_3309	0.35	+0.6
3,744,069	-		PP_3309	0.35	+1.4
3,744,069	-		PP_3309	0.35	+1.5
3,744,071	+		PP_3309	0.35	-0.2
3,744,072	-		PP_3309	0.35	+1.8
3,744,072	-		PP_3309	0.35	+0.6
3,744,077	+		PP_3309	0.36	+0.8
3,744,078	-		PP_3309	0.36	-0.7