Strain Fitness in Pseudomonas putida KT2440 around PP_2520

Experiment: R2A with Polymyxin B sulfate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.001 mg/ml
2,867,624	+				+0.2
2,867,624	+				-0.5
2,867,624	+				+1.3
2,867,625	-				+0.0
2,867,625	-				-0.8
2,868,078	+				+0.4
2,868,142	+				+0.4
2,868,143	-				+0.3
2,868,143	-				-0.3
2,868,143	-				+0.1
2,868,143	-				-0.5
2,868,143	-				+0.0
2,868,143	-				+0.3
2,868,170	+				+0.1
2,868,171	-				+0.5
2,868,171	-				-1.5
2,868,171	-				+0.9
2,868,171	-				+2.6
2,868,264	+				+1.1
2,868,389	+		PP_2520	0.38	+0.5
2,868,443	+		PP_2520	0.84	+1.4
2,868,443	+		PP_2520	0.84	+0.4
2,868,444	-		PP_2520	0.85	+0.9
2,868,444	-		PP_2520	0.85	+0.0
2,868,527	+				+0.6
2,868,527	+				+0.1
2,868,527	+				-0.9
2,868,527	+				-0.5
2,868,527	+				-0.2
2,868,527	+				-2.2
2,868,574	+				+0.6
2,868,575	-				+0.8
2,868,575	-				+0.2
2,868,609	+				+3.8
2,868,610	-				+0.4
2,868,983	+				-0.5
2,869,005	+				-0.3
2,869,104	+				+0.2
2,869,251	+				+1.1
2,869,251	+				+0.1
2,869,252	-				+0.2