Strain Fitness in Pseudomonas putida KT2440 around PP_5711

Experiment: R2A with Polymyxin B sulfate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.001 mg/ml
5,397,740	+		PP_4742	0.43	-0.5
5,397,749	+		PP_4742	0.44	+0.0
5,397,749	+		PP_4742	0.44	-0.5
5,397,981	+		PP_4742	0.57	-0.1
5,398,145	+		PP_4742	0.67	-1.0
5,398,145	+		PP_4742	0.67	-0.8
5,398,146	-		PP_4742	0.67	-0.1
5,398,192	-		PP_4742	0.69	-0.2
5,398,256	+		PP_4742	0.73	+0.0
5,398,277	+		PP_4742	0.74	-0.9
5,398,277	+		PP_4742	0.74	-0.5
5,398,278	-		PP_4742	0.74	+0.3
5,398,326	+		PP_4742	0.77	-0.4
5,398,328	+		PP_4742	0.77	+0.9
5,398,329	-		PP_4742	0.77	-0.1
5,398,332	-		PP_4742	0.78	-0.5
5,398,400	+		PP_4742	0.82	-0.4
5,398,498	+		PP_4742	0.87	+0.3
5,398,499	-		PP_4742	0.87	+0.1
5,398,542	+		PP_4742	0.90	+1.1
5,398,650	-				-1.1
5,398,661	+				-0.8
5,398,760	+				-0.9
5,398,816	-		PP_5711	0.20	+1.9
5,398,872	+		PP_5711	0.33	+0.0
5,398,873	-		PP_5711	0.33	+0.2
5,398,886	+		PP_5711	0.36	-0.3
5,398,933	+		PP_5711	0.47	+0.8
5,398,966	+		PP_5711	0.55	+0.6
5,399,156	+				-0.4
5,399,161	-				-0.5
5,399,323	-				-0.4
5,399,410	-		PP_4743	0.15	+0.9
5,399,897	+		PP_4743	0.49	+0.4