Strain Fitness in Pseudomonas putida KT2440 around PP_3205

Experiment: R2A with Polymyxin B sulfate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.001 mg/ml
3,637,299	-				-0.1
3,637,386	-				-0.1
3,637,464	+				+0.3
3,637,464	+				-0.1
3,637,465	-				-0.3
3,637,563	-		PP_3204	0.24	+0.8
3,637,563	-		PP_3204	0.24	+0.5
3,637,817	+		PP_3204	0.67	+0.2
3,637,818	-		PP_3204	0.68	-0.4
3,638,161	+		PP_3205	0.16	+0.6
3,638,345	-		PP_3205	0.34	+0.2
3,638,345	-		PP_3205	0.34	+1.9
3,638,387	+		PP_3205	0.38	+1.5
3,638,388	-		PP_3205	0.39	+0.5
3,638,781	-		PP_3205	0.78	+0.2
3,639,188	-		PP_3206	0.20	+0.1
3,639,252	+		PP_3206	0.27	-0.7
3,639,264	+		PP_3206	0.28	-0.7
3,639,340	-		PP_3206	0.36	-1.0
3,639,360	+		PP_3206	0.38	-0.3
3,639,420	+		PP_3206	0.44	-1.3
3,639,421	-		PP_3206	0.44	-0.8
3,639,577	-		PP_3206	0.60	+0.5
3,639,577	-		PP_3206	0.60	+0.4
3,639,577	-		PP_3206	0.60	+0.5
3,639,848	+		PP_3206	0.87	+0.3
3,639,849	-		PP_3206	0.87	-0.4
3,639,908	+				-0.1
3,639,970	+				+0.1