Strain Fitness in Escherichia coli BW25113 around b4676

Experiment: M9 with Pyridoxine HCl 100 nM and 4-Deoxypyridoxine 25 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Pyridoxine HCl 100 nM and 4-Deoxypyridoxine 25 uM
1,875,848	-	yeaP	b1794	0.11	-1.0
1,876,009	+	yeaP	b1794	0.26	+0.4
1,876,093	+	yeaP	b1794	0.35	+0.7
1,876,241	-	yeaP	b1794	0.49	-1.5
1,876,257	+	yeaP	b1794	0.50	-0.4
1,876,257	+	yeaP	b1794	0.50	-0.7
1,876,257	+	yeaP	b1794	0.50	+0.4
1,876,257	+	yeaP	b1794	0.50	-0.6
1,876,257	+	yeaP	b1794	0.50	+0.4
1,876,347	+	yeaP	b1794	0.59	-0.1
1,876,361	-	yeaP	b1794	0.61	-0.1
1,876,377	+	yeaP	b1794	0.62	-0.1
1,876,377	+	yeaP	b1794	0.62	-0.7
1,876,421	-	yeaP	b1794	0.66	-0.4
1,876,421	-	yeaP	b1794	0.66	+0.6
1,876,452	+	yeaP	b1794	0.69	-0.1
1,876,480	+	yeaP	b1794	0.72	-1.3
1,876,506	+	yeaP	b1794	0.75	-0.2
1,876,616	+	yeaP	b1794	0.85	-0.2
1,876,639	+	yeaP	b1794	0.88	+0.4
1,876,639	+	yeaP	b1794	0.88	+0.9
1,876,668	+				-0.4
1,876,678	-				+1.8
1,876,707	+				-0.2
1,876,753	+				-0.2
1,876,753	+				-0.3
1,876,753	+				+0.5
1,876,770	+				+0.5
1,876,879	-	yoaK	b4676	0.83	+0.2
1,876,879	-	yoaK	b4676	0.83	+1.8
1,876,889	-				-0.2
1,876,889	-				-0.5
1,876,945	+	yoaJ	b4675	0.63	-0.1
1,876,945	+	yoaJ	b4675	0.63	-0.9
1,876,955	+	yoaJ	b4675	0.76	-0.2
1,876,963	-	yoaJ	b4675	0.87	+0.2
1,876,963	-	yoaJ	b4675	0.87	+0.8
1,877,005	+				+0.8
1,877,014	-				+0.6
1,877,035	+				-0.5
1,877,135	-	yeaQ	b1795	0.42	-0.5
1,877,137	+	yeaQ	b1795	0.43	+0.4
1,877,145	-	yeaQ	b1795	0.46	+1.2
1,877,145	-	yeaQ	b1795	0.46	-0.0
1,877,174	-	yeaQ	b1795	0.57	-0.1
1,877,175	-	yeaQ	b1795	0.58	+0.0
1,877,260	+				+0.3
1,877,433	+				+0.5
1,877,476	+	yoaG	b1796	0.27	-1.5
1,877,476	+	yoaG	b1796	0.27	+0.1
1,877,484	-	yoaG	b1796	0.31	+0.2
1,877,513	-	yoaG	b1796	0.47	-0.2
1,877,571	-	yoaG	b1796	0.79	+0.4
1,877,602	-				-0.4
1,877,658	-	yeaR	b1797	0.12	+0.3
1,877,663	+	yeaR	b1797	0.14	-0.7
1,877,663	+	yeaR	b1797	0.14	+0.0
1,877,714	+	yeaR	b1797	0.28	-0.6
1,877,715	-	yeaR	b1797	0.28	-1.1
1,877,764	+	yeaR	b1797	0.42	-1.4
1,877,765	+	yeaR	b1797	0.42	+0.6
1,877,765	+	yeaR	b1797	0.42	+0.1
1,877,791	+	yeaR	b1797	0.49	-0.4
1,877,804	-	yeaR	b1797	0.53	-1.0
1,877,804	-	yeaR	b1797	0.53	+0.5
1,877,804	-	yeaR	b1797	0.53	+0.1
1,877,814	-	yeaR	b1797	0.56	+0.8
1,877,859	-	yeaR	b1797	0.68	-1.1