Strain Fitness in Escherichia coli BW25113 around b1394

Experiment: M9 with Pyridoxine HCl 20 nM and 4-Deoxypyridoxine 0.25 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with Pyridoxine HCl 20 nM and 4-Deoxypyridoxine 0.25 uM
1,455,315	+	paaE	b1392	0.80	-0.3
1,455,392	-	paaE	b1392	0.88	-0.7
1,455,429	-				-1.9
1,455,610	+	paaF	b1393	0.12	-0.9
1,456,073	+	paaF	b1393	0.72	-1.0
1,456,216	-				+0.1
1,456,216	-				+0.7
1,456,490	+	paaG	b1394	0.26	-0.8
1,456,637	+	paaG	b1394	0.44	-0.5
1,456,780	-	paaG	b1394	0.62	-1.1
1,456,910	+	paaG	b1394	0.79	-1.4
1,457,029	+				-0.0
1,457,029	+				-0.8
1,457,192	+				+0.1
1,457,264	+	paaH	b1395	0.13	-0.4
1,457,625	+	paaH	b1395	0.38	-0.1
1,457,625	+	paaH	b1395	0.38	+0.0
1,457,668	+	paaH	b1395	0.41	+0.6
1,457,750	+	paaH	b1395	0.47	-0.7
1,457,822	+	paaH	b1395	0.52	-0.2
1,457,921	-	paaH	b1395	0.59	-2.3
1,457,921	-	paaH	b1395	0.59	-0.2
1,457,941	+	paaH	b1395	0.60	-0.0
1,457,979	+	paaH	b1395	0.63	-3.9
1,458,061	-	paaH	b1395	0.69	+0.4
1,458,061	-	paaH	b1395	0.69	+1.8