Strain Fitness in Escherichia coli BW25113 around b3774

Experiment: M9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9
3,955,105	-	ilvY	b3773	0.17	-1.5
3,955,105	-	ilvY	b3773	0.17	-1.9
3,955,105	-	ilvY	b3773	0.17	-2.0
3,955,105	-	ilvY	b3773	0.17	-0.8
3,955,169	+	ilvY	b3773	0.24	-2.1
3,955,225	+	ilvY	b3773	0.31	-1.5
3,955,225	+	ilvY	b3773	0.31	-0.7
3,955,233	-	ilvY	b3773	0.32	-2.4
3,955,233	-	ilvY	b3773	0.32	-1.2
3,955,283	+	ilvY	b3773	0.37	-1.4
3,955,291	-	ilvY	b3773	0.38	-2.6
3,955,292	+	ilvY	b3773	0.38	-2.2
3,955,317	+	ilvY	b3773	0.41	-1.7
3,955,317	+	ilvY	b3773	0.41	-1.0
3,955,330	-	ilvY	b3773	0.43	-1.8
3,955,356	-	ilvY	b3773	0.45	-1.4
3,955,356	-	ilvY	b3773	0.45	-2.6
3,955,458	-	ilvY	b3773	0.57	-1.4
3,955,482	-	ilvY	b3773	0.60	-1.6
3,955,482	-	ilvY	b3773	0.60	-0.9
3,955,483	+	ilvY	b3773	0.60	-0.6
3,955,498	-	ilvY	b3773	0.61	-1.5
3,955,505	+	ilvY	b3773	0.62	+0.2
3,955,540	-	ilvY	b3773	0.66	-1.0
3,955,540	-	ilvY	b3773	0.66	-1.7
3,955,540	-	ilvY	b3773	0.66	-1.3
3,955,620	-	ilvY	b3773	0.75	-1.3
3,955,622	-	ilvY	b3773	0.75	-2.5
3,955,660	+	ilvY	b3773	0.79	-1.2
3,955,719	-	ilvY	b3773	0.86	-2.1
3,955,730	+	ilvY	b3773	0.87	-0.7
3,955,740	+	ilvY	b3773	0.88	-0.1
3,955,749	+	ilvY	b3773	0.89	-0.4
3,955,749	+	ilvY	b3773	0.89	-0.3
3,955,767	+				+0.1
3,955,767	+				-0.3
3,955,774	+				+1.0
3,955,774	+				-0.6
3,955,860	-				-0.7
3,955,984	-				-0.3
3,956,001	+				-0.4
3,956,134	-				-2.6
3,956,140	-				-3.8
3,956,145	-	ilvC	b3774	0.10	-2.7
3,956,146	-	ilvC	b3774	0.10	-2.5
3,956,154	+	ilvC	b3774	0.11	-5.0
3,956,160	+	ilvC	b3774	0.11	-3.4
3,956,178	-	ilvC	b3774	0.13	-1.3
3,956,181	+	ilvC	b3774	0.13	-4.1
3,956,181	+	ilvC	b3774	0.13	-4.8
3,956,228	+	ilvC	b3774	0.16	-2.4
3,956,236	-	ilvC	b3774	0.16	-2.6
3,956,267	+	ilvC	b3774	0.19	-2.6
3,956,303	+	ilvC	b3774	0.21	-3.3
3,956,311	-	ilvC	b3774	0.22	-4.6
3,956,327	+	ilvC	b3774	0.23	-4.9
3,956,327	+	ilvC	b3774	0.23	-4.3
3,956,329	+	ilvC	b3774	0.23	-3.9
3,956,335	-	ilvC	b3774	0.23	-2.8
3,956,337	-	ilvC	b3774	0.23	-2.7
3,956,339	+	ilvC	b3774	0.23	-2.5
3,956,350	-	ilvC	b3774	0.24	-1.2
3,956,371	+	ilvC	b3774	0.26	-0.7
3,956,371	+	ilvC	b3774	0.26	-2.5
3,956,371	+	ilvC	b3774	0.26	-2.2
3,956,371	+	ilvC	b3774	0.26	-4.2
3,956,390	+	ilvC	b3774	0.27	-3.4
3,956,435	+	ilvC	b3774	0.30	-2.2
3,956,435	+	ilvC	b3774	0.30	-3.3
3,956,436	-	ilvC	b3774	0.30	-2.0
3,956,473	-	ilvC	b3774	0.33	-5.7
3,956,482	+	ilvC	b3774	0.33	-3.7
3,956,496	+	ilvC	b3774	0.34	-3.7
3,956,597	+	ilvC	b3774	0.41	-4.4
3,956,670	-	ilvC	b3774	0.46	-3.5
3,956,676	+	ilvC	b3774	0.46	-3.3
3,956,680	-	ilvC	b3774	0.47	-2.7
3,956,700	-	ilvC	b3774	0.48	-3.5
3,956,775	+	ilvC	b3774	0.53	-2.5
3,956,798	+	ilvC	b3774	0.55	-2.9
3,956,798	+	ilvC	b3774	0.55	-2.3
3,956,809	+	ilvC	b3774	0.55	-2.0
3,956,809	+	ilvC	b3774	0.55	-2.0
3,956,821	+	ilvC	b3774	0.56	-2.9
3,956,821	+	ilvC	b3774	0.56	-2.4
3,956,846	+	ilvC	b3774	0.58	-3.5
3,956,854	-	ilvC	b3774	0.58	-2.8
3,956,854	-	ilvC	b3774	0.58	-4.3
3,956,874	+	ilvC	b3774	0.60	-3.5
3,956,874	-	ilvC	b3774	0.60	-3.7
3,956,949	-	ilvC	b3774	0.65	-1.8
3,956,979	-	ilvC	b3774	0.67	-3.4
3,956,979	-	ilvC	b3774	0.67	-4.4
3,957,030	-	ilvC	b3774	0.70	-3.2
3,957,060	-	ilvC	b3774	0.72	-3.5
3,957,136	+	ilvC	b3774	0.77	-4.8
3,957,142	-	ilvC	b3774	0.78	-2.7
3,957,178	-	ilvC	b3774	0.80	-2.6
3,957,225	+	ilvC	b3774	0.83	-3.1
3,957,241	+	ilvC	b3774	0.85	-0.9
3,957,264	+	ilvC	b3774	0.86	-4.0
3,957,264	+	ilvC	b3774	0.86	-3.5
3,957,269	-	ilvC	b3774	0.86	-2.2
3,957,272	+	ilvC	b3774	0.87	-1.0
3,957,272	-	ilvC	b3774	0.87	-3.0
3,957,312	+	ilvC	b3774	0.89	-2.5
3,957,319	+	ilvC	b3774	0.90	-3.6
3,957,319	+	ilvC	b3774	0.90	-3.0
3,957,365	+				-3.2
3,957,365	+				-4.0
3,957,400	+				-0.9
3,957,400	+				-3.1
3,957,420	-				-3.7
3,957,426	+				-1.0
3,957,439	+				+0.2
3,957,494	+				+0.8
3,957,498	+				-0.2
3,957,498	+				-0.5
3,957,500	+				-0.5
3,957,508	-				-1.3
3,957,559	-				+0.1
3,957,572	-				-0.4
3,957,572	-				+0.0
3,957,580	-				-0.4
3,957,581	+				+1.0
3,957,602	+	ppiC	b3775	0.17	-1.4
3,957,606	-	ppiC	b3775	0.18	+0.1
3,957,678	-	ppiC	b3775	0.44	-0.2
3,957,692	-	ppiC	b3775	0.49	+0.1
3,957,692	-	ppiC	b3775	0.49	-0.4
3,957,765	-	ppiC	b3775	0.74	-0.3
3,957,767	+	ppiC	b3775	0.75	+0.1
3,957,767	+	ppiC	b3775	0.75	+1.0
3,957,838	+				-0.1
3,957,838	+				+0.7
3,957,842	+				-0.1
3,957,842	+				+0.5
3,957,842	+				-0.0
3,957,916	-				+0.4
3,957,916	-				+0.9
3,957,922	+				-0.7
3,957,931	-				-0.1
3,957,966	-				+0.3
3,957,966	-				-0.9
3,957,999	-				+0.3
3,958,000	+				+0.1
3,958,006	-				-0.3
3,958,053	+				-0.1
3,958,053	+				-0.4
3,958,073	-				-0.2
3,958,080	+	yifN	b3777	0.10	+1.0
3,958,082	+	yifN	b3777	0.10	+0.8
3,958,088	-	yifN	b3777	0.12	+0.4
3,958,094	-	yifN	b3777	0.13	+0.5
3,958,106	-	yifN	b3777	0.16	+0.4
3,958,106	-	yifN	b3777	0.16	+0.8
3,958,111	+	yifN	b3777	0.17	+0.1
3,958,113	-	yifN	b3777	0.17	+0.2
3,958,113	-	yifN	b3777	0.17	+0.1
3,958,115	+	yifN	b3777	0.18	+0.1
3,958,126	+	yifN	b3777	0.20	+0.1
3,958,135	-	yifN	b3777	0.22	+0.8
3,958,135	-	yifN	b3777	0.22	+0.2
3,958,137	-	yifN	b3777	0.23	+0.7
3,958,141	+	yifN	b3777	0.24	+0.1
3,958,144	-	yifN	b3777	0.24	-0.2
3,958,154	-	yifN	b3777	0.27	+0.3
3,958,177	-	yifN	b3777	0.32	+0.1
3,958,185	-	yifN	b3777	0.33	+0.3
3,958,191	-	yifN	b3777	0.35	+0.2
3,958,191	-	yifN	b3777	0.35	-0.1
3,958,295	-	yifN	b3777	0.58	-0.5
3,958,307	-	yifN	b3777	0.61	+0.1
3,958,352	+	yifN	b3777	0.71	-0.0
3,958,391	-	yifN	b3777	0.79	-0.4
3,958,391	-	yifN	b3777	0.79	+0.3
3,958,393	-	yifN	b3777	0.80	+0.5
3,958,403	-	yifN	b3777	0.82	+0.2
3,958,403	-	yifN	b3777	0.82	+0.7
3,958,419	+	yifN	b3777	0.86	-0.0
3,958,435	-	yifN	b3777	0.89	-0.5
3,958,435	-	yifN	b3777	0.89	+0.6
3,958,459	+				+0.3