Strain Fitness in Escherichia coli BW25113 around b1773
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,854,143 | - | b1772 | b1772 | 0.15 | -0.3 |
1,854,143 | - | b1772 | b1772 | 0.15 | +0.6 |
1,854,178 | - | b1772 | b1772 | 0.18 | -0.1 |
1,854,178 | - | b1772 | b1772 | 0.18 | -0.2 |
1,854,223 | - | b1772 | b1772 | 0.23 | -0.2 |
1,854,246 | - | b1772 | b1772 | 0.25 | +1.3 |
1,854,321 | - | b1772 | b1772 | 0.33 | +1.2 |
1,854,389 | + | b1772 | b1772 | 0.41 | +1.6 |
1,854,397 | - | b1772 | b1772 | 0.41 | +2.2 |
1,854,425 | - | b1772 | b1772 | 0.44 | -0.2 |
1,854,425 | - | b1772 | b1772 | 0.44 | +0.6 |
1,854,461 | - | b1772 | b1772 | 0.48 | +0.6 |
1,854,461 | - | b1772 | b1772 | 0.48 | +0.6 |
1,854,550 | - | b1772 | b1772 | 0.57 | +1.6 |
1,854,626 | + | b1772 | b1772 | 0.66 | +1.6 |
1,854,626 | + | b1772 | b1772 | 0.66 | +1.6 |
1,854,644 | - | b1772 | b1772 | 0.67 | +2.9 |
1,854,644 | - | b1772 | b1772 | 0.67 | +1.6 |
1,854,651 | + | b1772 | b1772 | 0.68 | +1.6 |
1,854,652 | + | b1772 | b1772 | 0.68 | -0.0 |
1,854,670 | + | b1772 | b1772 | 0.70 | +1.6 |
1,854,670 | + | b1772 | b1772 | 0.70 | +1.6 |
1,854,935 | - | +1.6 | |||
1,854,935 | - | +1.6 | |||
1,855,036 | - | -0.1 | |||
1,855,081 | - | ydjI | b1773 | 0.15 | -0.5 |
1,855,087 | - | ydjI | b1773 | 0.16 | -1.0 |
1,855,097 | - | ydjI | b1773 | 0.17 | +1.6 |
1,855,184 | - | ydjI | b1773 | 0.27 | +0.6 |
1,855,333 | + | ydjI | b1773 | 0.45 | -0.7 |
1,855,336 | + | ydjI | b1773 | 0.45 | +1.6 |
1,855,336 | + | ydjI | b1773 | 0.45 | +1.6 |
1,855,341 | + | ydjI | b1773 | 0.46 | +0.6 |
1,855,378 | + | ydjI | b1773 | 0.50 | -0.0 |
1,855,403 | + | ydjI | b1773 | 0.53 | +1.6 |
1,855,411 | + | ydjI | b1773 | 0.54 | +1.6 |
1,855,550 | + | ydjI | b1773 | 0.71 | +1.6 |
1,855,591 | + | ydjI | b1773 | 0.76 | +1.6 |
1,855,593 | + | ydjI | b1773 | 0.76 | +2.6 |
1,855,593 | + | ydjI | b1773 | 0.76 | +1.6 |
1,855,868 | - | +0.6 | |||
1,855,880 | - | -0.1 | |||
1,855,890 | - | -0.0 | |||
1,855,890 | - | -0.9 | |||
1,855,907 | - | +0.4 | |||
1,855,944 | - | ydjJ | b1774 | 0.12 | -1.1 |
1,855,944 | - | ydjJ | b1774 | 0.12 | -0.1 |
1,855,973 | - | ydjJ | b1774 | 0.15 | -0.3 |
1,855,973 | - | ydjJ | b1774 | 0.15 | -0.1 |
1,855,973 | - | ydjJ | b1774 | 0.15 | +0.8 |
1,855,974 | - | ydjJ | b1774 | 0.15 | +0.7 |
1,855,985 | - | ydjJ | b1774 | 0.16 | +1.2 |
1,855,985 | - | ydjJ | b1774 | 0.16 | +0.6 |
1,855,985 | - | ydjJ | b1774 | 0.16 | +0.1 |
1,855,985 | - | ydjJ | b1774 | 0.16 | +0.3 |
1,855,990 | - | ydjJ | b1774 | 0.17 | -0.1 |
1,855,990 | - | ydjJ | b1774 | 0.17 | +1.4 |
1,856,001 | - | ydjJ | b1774 | 0.18 | -1.2 |
1,856,050 | - | ydjJ | b1774 | 0.23 | -0.0 |
1,856,050 | - | ydjJ | b1774 | 0.23 | +1.1 |
1,856,052 | + | ydjJ | b1774 | 0.23 | -0.0 |
1,856,060 | - | ydjJ | b1774 | 0.24 | -0.9 |
1,856,096 | - | ydjJ | b1774 | 0.27 | +0.2 |
1,856,096 | - | ydjJ | b1774 | 0.27 | +0.6 |
1,856,107 | - | ydjJ | b1774 | 0.28 | -0.2 |
1,856,107 | - | ydjJ | b1774 | 0.28 | +0.9 |
1,856,109 | - | ydjJ | b1774 | 0.28 | +1.2 |
1,856,174 | - | ydjJ | b1774 | 0.34 | -0.6 |
1,856,174 | - | ydjJ | b1774 | 0.34 | -0.6 |
1,856,209 | - | ydjJ | b1774 | 0.38 | -0.7 |
1,856,209 | - | ydjJ | b1774 | 0.38 | -0.7 |
1,856,322 | - | ydjJ | b1774 | 0.49 | +0.4 |
1,856,381 | + | ydjJ | b1774 | 0.54 | +0.6 |
1,856,473 | + | ydjJ | b1774 | 0.63 | +2.8 |
1,856,534 | + | ydjJ | b1774 | 0.69 | -0.7 |
1,856,633 | + | ydjJ | b1774 | 0.78 | +1.6 |
1,856,636 | - | ydjJ | b1774 | 0.79 | +0.9 |
1,856,639 | + | ydjJ | b1774 | 0.79 | +1.3 |
1,856,639 | + | ydjJ | b1774 | 0.79 | +1.6 |
1,856,639 | + | ydjJ | b1774 | 0.79 | +0.6 |
1,856,639 | + | ydjJ | b1774 | 0.79 | +0.8 |
1,856,647 | - | ydjJ | b1774 | 0.80 | +1.6 |
1,856,647 | - | ydjJ | b1774 | 0.80 | +0.8 |
1,856,647 | - | ydjJ | b1774 | 0.80 | +0.3 |
1,856,647 | - | ydjJ | b1774 | 0.80 | -0.4 |
1,856,660 | + | ydjJ | b1774 | 0.81 | -0.0 |
Or see this region's nucleotide sequence