Strain Fitness in Pseudomonas putida KT2440 around PP_4268

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
4,851,659	-				-0.6
4,851,867	-		PP_4267	0.23	+0.5
4,851,867	-		PP_4267	0.23	-0.5
4,851,867	-		PP_4267	0.23	+0.1
4,852,055	+		PP_4267	0.54	-0.0
4,852,055	+		PP_4267	0.54	-0.8
4,852,055	+		PP_4267	0.54	-0.9
4,852,055	+		PP_4267	0.54	-1.3
4,852,055	+		PP_4267	0.54	-0.2
4,852,055	+		PP_4267	0.54	+0.0
4,852,056	-		PP_4267	0.55	+0.4
4,852,056	-		PP_4267	0.55	-0.8
4,852,351	+				-0.1
4,852,351	+				-0.6
4,852,364	-				-0.3
4,852,365	+				-0.5
4,852,627	+				+0.4
4,852,628	-				-0.5
4,852,628	-				+0.8
4,852,752	+		PP_4268	0.38	-0.0
4,852,753	-		PP_4268	0.38	-3.0
4,852,967	-				+2.0
4,852,967	-				-1.2
4,852,969	-				-0.0
4,852,969	-				-0.6
4,852,969	-				-0.2
4,853,027	-				+0.1
4,853,039	+				+0.1
4,853,040	-				-0.3
4,853,053	-				-0.6
4,853,063	+				-1.0
4,853,063	+				-1.4
4,853,063	+				-0.0
4,853,064	-				-0.9
4,853,064	-				+1.1
4,853,064	-				+0.5
4,853,064	-				-0.2
4,853,064	-				-0.6
4,853,064	-				-1.5
4,853,066	+				+1.6
4,853,067	-				-2.8
4,853,067	-				+1.2
4,853,067	-				-0.2