Strain Fitness in Pseudomonas putida KT2440 around PP_1606

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,799,236	-				+1.3
1,799,350	+		PP_1605	0.23	-0.5
1,799,512	+		PP_1605	0.49	+1.4
1,799,513	-		PP_1605	0.49	-1.0
1,799,749	+		PP_1605	0.87	+0.7
1,799,749	+		PP_1605	0.87	-1.2
1,799,965	+				+0.0
1,799,965	+				-0.6
1,799,966	-				-1.1
1,799,966	-				-0.7
1,799,969	+				-1.5
1,800,004	+				-1.4
1,803,555	+				-1.1
1,803,584	+				+0.0
1,803,589	+				+0.8
1,803,628	+				-1.1