Strain Fitness in Pseudomonas putida KT2440 around PP_1260

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,439,338	+		PP_1259	0.79	+0.5
1,439,411	-		PP_1259	0.84	+0.6
1,439,434	+		PP_1259	0.85	+1.1
1,439,491	+		PP_1259	0.89	+0.0
1,439,491	+		PP_1259	0.89	-0.9
1,439,492	-		PP_1259	0.89	-0.5
1,439,512	-				-0.5
1,439,643	+				-0.2
1,439,643	+				+1.3
1,439,643	+				-0.7
1,439,698	-				+0.1
1,439,772	+				-0.9
1,439,772	+				+0.6
1,439,995	-				+0.1
1,442,039	+				-0.7