Strain Fitness in Pseudomonas putida KT2440 around PP_4796

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,459,437	+		PP_4795	0.83	-2.2
5,459,529	+				-1.4
5,459,540	+				+0.1
5,460,633	-				-0.7
5,460,710	+				-0.0
5,460,732	+				-2.7
5,460,738	+				+1.5
5,460,738	+				+1.9
5,460,760	-				+1.7
5,460,760	-				+0.5
5,460,761	+				+0.8
5,460,761	+				+0.6
5,460,761	+				+0.3
5,460,761	+				+0.8
5,460,761	+				+0.6
5,460,762	-				+0.7
5,460,762	-				+0.0
5,460,762	-				+1.3
5,460,762	-				-0.1
5,460,762	-				-1.6
5,460,762	-				+0.3
5,460,762	-				-0.4
5,460,797	-				-0.3
5,460,942	-		PP_4797	0.64	+0.3
5,460,983	+		PP_4797	0.89	+0.4
5,460,984	-				+1.1
5,461,024	+				+0.2
5,461,024	+				+1.7
5,461,024	+				+1.0
5,461,024	+				+0.7
5,461,025	-				-2.6
5,461,025	-				-2.6
5,461,025	-				-1.1
5,461,025	-				-0.5
5,461,025	-				-0.4
5,461,409	+		PP_4798	0.26	+0.6
5,461,410	-		PP_4798	0.26	+0.3
5,461,503	-		PP_4798	0.34	-2.6