Strain Fitness in Pseudomonas putida KT2440 around PP_4190
Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X |
|---|---|---|---|---|---|
| remove | |||||
| 4,735,132 | + | -1.0 | |||
| 4,735,328 | - | -0.8 | |||
| 4,735,461 | + | -1.6 | |||
| 4,735,547 | - | +2.0 | |||
| 4,735,570 | + | -0.3 | |||
| 4,735,783 | - | -0.4 | |||
| 4,735,787 | - | +0.7 | |||
| 4,735,859 | - | -0.6 | |||
| 4,735,868 | - | -1.8 | |||
| 4,735,868 | - | +1.5 | |||
| 4,735,880 | - | -1.8 |
Or see this region's nucleotide sequence