Strain Fitness in Pseudomonas putida KT2440 around PP_4174

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,715,938	+		PP_4173	0.60	-0.3
4,716,124	-		PP_4173	0.70	+0.1
4,716,187	+		PP_4173	0.73	-1.7
4,716,188	-		PP_4173	0.73	-0.6
4,716,188	-		PP_4173	0.73	+0.2
4,716,290	-		PP_4173	0.79	-0.0
4,716,319	+		PP_4173	0.80	+0.0
4,716,320	-		PP_4173	0.80	+0.6
4,716,391	+		PP_4173	0.84	-0.1
4,716,391	+		PP_4173	0.84	-1.3
4,716,391	+		PP_4173	0.84	-0.3
4,716,391	+		PP_4173	0.84	+0.0
4,716,392	-		PP_4173	0.84	+0.4
4,716,392	-		PP_4173	0.84	-1.1
4,716,490	-		PP_4173	0.89	+2.3
4,716,490	-		PP_4173	0.89	+1.0
4,716,610	-				+1.0
4,716,820	+				-0.4