Strain Fitness in Pseudomonas putida KT2440 around PP_2152

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
2,459,614	+				-0.6
2,459,767	-		PP_2152	0.27	-0.4
2,459,858	+		PP_2152	0.39	-0.8
2,459,904	+		PP_2152	0.46	-0.2
2,459,904	+		PP_2152	0.46	-1.7
2,460,279	+				-0.4
2,460,280	-				+0.3
2,460,388	+		PP_2153	0.13	-0.8
2,460,389	-		PP_2153	0.14	+0.3
2,460,389	-		PP_2153	0.14	-0.7
2,460,717	+		PP_2153	0.82	-0.0
2,460,717	+		PP_2153	0.82	+0.4
2,460,840	+				-1.4
2,460,840	+				+0.8
2,460,840	+				-0.8
2,460,871	+				-0.2
2,460,897	+				+0.2
2,460,897	+				-0.2