Strain Fitness in Escherichia coli BW25113 around b2292

Experiment: Phage_N4_cage_4_mouse_1_Cecum_40 hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phage_N4_cage_4_mouse_1_Cecum_40 hr
2,406,584	-	yfbQ	b2290	0.82	-1.2
2,406,584	-	yfbQ	b2290	0.82	+0.5
2,406,684	+				+0.6
2,406,692	-				-1.2
2,406,692	-				+2.6
2,406,692	-				-1.2
2,406,692	-				-0.0
2,406,726	-				+0.3
2,406,865	+				+2.4
2,407,100	-	yfbR	b2291	0.36	-0.3
2,407,167	-	yfbR	b2291	0.47	+0.6
2,407,230	-	yfbR	b2291	0.58	+0.0
2,407,256	-	yfbR	b2291	0.62	+0.1
2,407,466	-				-0.2
2,407,483	-				+1.4
2,407,483	-				+1.1
2,407,485	-				+0.1
2,407,485	-				+0.2
2,407,558	+				+0.9
2,407,677	-				-5.9
2,407,677	-				+0.3
2,407,769	-	yfbS	b2292	0.12	+0.4
2,407,775	+	yfbS	b2292	0.13	-0.0
2,407,777	+	yfbS	b2292	0.13	-3.9
2,407,806	-	yfbS	b2292	0.14	-0.2
2,407,812	-	yfbS	b2292	0.15	-1.4
2,407,812	-	yfbS	b2292	0.15	-0.1
2,408,014	-	yfbS	b2292	0.26	+0.1
2,408,073	+	yfbS	b2292	0.29	+0.3
2,408,126	+	yfbS	b2292	0.32	+0.8
2,408,145	-	yfbS	b2292	0.33	-0.1
2,408,164	-	yfbS	b2292	0.34	+0.7
2,408,166	+	yfbS	b2292	0.34	-0.1
2,408,191	+	yfbS	b2292	0.35	+1.5
2,408,252	+	yfbS	b2292	0.39	+1.5
2,408,252	+	yfbS	b2292	0.39	-0.9
2,408,275	+	yfbS	b2292	0.40	+0.6
2,408,400	+	yfbS	b2292	0.47	+0.2
2,408,408	-	yfbS	b2292	0.47	+0.5
2,408,408	-	yfbS	b2292	0.47	+0.5
2,408,413	-	yfbS	b2292	0.48	+1.5
2,408,494	+	yfbS	b2292	0.52	+0.5
2,408,519	-	yfbS	b2292	0.53	+1.2
2,408,593	-	yfbS	b2292	0.57	+0.9
2,408,736	+	yfbS	b2292	0.65	+0.4
2,408,764	-	yfbS	b2292	0.67	-0.6
2,408,775	-	yfbS	b2292	0.67	+1.8
2,408,818	+	yfbS	b2292	0.70	+0.0
2,408,818	+	yfbS	b2292	0.70	+3.0
2,408,911	+	yfbS	b2292	0.75	+0.7
2,408,911	+	yfbS	b2292	0.75	+1.5
2,408,932	-	yfbS	b2292	0.76	+0.7
2,409,178	+	yfbS	b2292	0.89	+0.0
2,409,178	+	yfbS	b2292	0.89	-0.1
2,409,195	+				+0.7
2,409,195	+				+1.9
2,409,208	-				+0.6
2,409,251	-				-0.4
2,409,258	-				+0.4
2,409,513	+				-0.0
2,409,636	+	yfbT	b2293	0.27	+0.0
2,409,641	+	yfbT	b2293	0.28	+1.0
2,409,913	-	yfbT	b2293	0.69	-0.8
2,410,159	+				+0.6
2,410,161	-				-0.1
2,410,287	-	b2294	b2294	0.33	+0.1
2,410,358	+	b2294	b2294	0.48	-3.0
2,410,358	+	b2294	b2294	0.48	+0.1