Strain Fitness in Pseudomonas putida KT2440 around PP_4929

Experiment: PUT 8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PUT 8 MOI 1
5,609,582	-				+2.6
5,609,605	-				-0.1
5,609,754	+		PP_4929	0.16	+1.2
5,609,754	+		PP_4929	0.16	+0.1
5,609,754	+		PP_4929	0.16	+0.2
5,609,755	-		PP_4929	0.16	+0.2
5,609,763	+		PP_4929	0.17	-1.0
5,609,829	+		PP_4929	0.24	+1.5
5,609,829	+		PP_4929	0.24	+0.9
5,609,850	-		PP_4929	0.27	-0.3
5,610,553	+				+0.6
5,610,553	+				+1.4
5,610,553	+				-4.1
5,610,553	+				+1.3
5,610,554	-				+1.3
5,610,595	+				+0.9
5,610,596	-				-0.4
5,610,597	+				+0.7
5,610,597	+				+0.3
5,610,597	+				+1.2
5,610,597	+				+0.7
5,610,597	+				+0.3
5,610,598	-				+0.8
5,610,598	-				+0.9
5,610,598	-				-0.2
5,610,598	-				+1.9
5,610,598	-				-2.5
5,610,598	-				+1.3
5,610,598	-				+0.9
5,610,601	+				-3.8
5,610,602	-				-1.8
5,610,704	-		PP_4930	0.35	+0.6
5,610,764	-		PP_4930	0.53	-1.7
5,610,820	+		PP_4930	0.70	-4.4
5,610,821	-		PP_4930	0.71	+1.2
5,610,821	-		PP_4930	0.71	+1.1
5,610,837	+		PP_4930	0.75	+0.6
5,610,837	+		PP_4930	0.75	+0.6
5,610,961	+				+0.1
5,610,962	-				-0.0
5,610,962	-				-0.1
5,610,963	+				-5.7
5,610,963	+				+0.9
5,610,963	+				+0.7
5,610,964	-				-0.9
5,610,964	-				+0.4
5,610,970	+				-0.1
5,610,970	+				+0.3
5,610,970	+				+0.4
5,610,971	-				+1.2
5,610,971	-				+1.2
5,610,972	+				-1.2
5,610,972	+				+1.7
5,610,972	+				-0.2
5,610,972	+				-0.4
5,610,972	+				-1.8