Strain Fitness in Pseudomonas putida KT2440 around PP_2775

Experiment: PUT 8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PUT 8 MOI 1
3,159,141	+		PP_2774	0.55	-3.9
3,159,156	+		PP_2774	0.56	+0.4
3,159,244	+		PP_2774	0.60	+0.8
3,159,244	+		PP_2774	0.60	+1.9
3,159,407	+		PP_2774	0.68	-0.1
3,159,457	-		PP_2774	0.70	-0.5
3,159,467	+		PP_2774	0.71	-1.5
3,159,468	-		PP_2774	0.71	-1.9
3,159,470	-		PP_2774	0.71	-0.9
3,159,633	+		PP_2774	0.79	+2.8
3,159,938	+				-3.0
3,159,939	-				+0.8
3,160,219	+		PP_2775	0.13	-3.6
3,160,220	-		PP_2775	0.13	+0.1
3,160,267	+		PP_2775	0.17	+0.2
3,160,267	+		PP_2775	0.17	-0.5
3,160,378	+		PP_2775	0.28	-1.1
3,160,378	+		PP_2775	0.28	-0.4
3,160,423	+		PP_2775	0.32	-1.0
3,160,424	-		PP_2775	0.32	+0.9
3,160,424	-		PP_2775	0.32	-1.4
3,160,444	+		PP_2775	0.34	+1.2
3,160,444	+		PP_2775	0.34	+0.2
3,160,456	+		PP_2775	0.35	-3.1
3,160,471	+		PP_2775	0.37	+0.2
3,160,480	-		PP_2775	0.38	+0.6
3,160,480	-		PP_2775	0.38	+1.1
3,160,490	-		PP_2775	0.38	-1.0
3,160,585	+		PP_2775	0.48	-0.8
3,160,586	-		PP_2775	0.48	-3.5
3,160,587	+		PP_2775	0.48	-1.0
3,160,684	+		PP_2775	0.57	+0.3
3,160,685	-		PP_2775	0.57	-2.0
3,160,717	+		PP_2775	0.60	-0.8
3,160,816	+		PP_2775	0.70	-4.9
3,161,247	+		PP_2776	0.13	+1.0
3,161,310	+		PP_2776	0.19	-0.4
3,161,743	+		PP_2776	0.66	-0.6
3,161,743	+		PP_2776	0.66	+1.3
3,161,743	+		PP_2776	0.66	+0.2
3,161,839	-		PP_2776	0.77	+1.6
3,161,911	+		PP_2776	0.85	+1.1