Strain Fitness in Pseudomonas putida KT2440 around PP_1511

Experiment: PUT 8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PUT 8 MOI 1
1,715,020	-				-0.8
1,715,095	+				+0.3
1,715,187	-		PP_1510	0.16	+1.2
1,715,433	+		PP_1510	0.45	+0.4
1,715,433	+		PP_1510	0.45	+1.1
1,715,434	+		PP_1510	0.46	-1.9
1,715,434	-		PP_1510	0.46	-3.3
1,715,580	+		PP_1510	0.63	-1.9
1,715,581	-		PP_1510	0.63	-0.8
1,715,581	-		PP_1510	0.63	-0.3
1,715,608	-		PP_1510	0.67	+0.6
1,715,790	+		PP_1510	0.88	-1.7
1,715,791	-		PP_1510	0.89	-0.3
1,715,994	+		PP_1511	0.16	+1.6
1,715,994	+		PP_1511	0.16	+0.7
1,715,995	-		PP_1511	0.16	-0.8
1,716,040	-		PP_1511	0.22	+1.5
1,716,144	+		PP_1511	0.38	+0.7
1,716,145	-		PP_1511	0.38	+1.3
1,716,215	+		PP_1511	0.48	-0.2
1,716,320	+		PP_1511	0.63	+0.9
1,716,512	+				-0.9
1,717,023	-		PP_1512	0.72	-4.0
1,717,023	-		PP_1512	0.72	+0.4
1,717,023	-		PP_1512	0.72	+0.8
1,717,091	-		PP_1512	0.83	-0.3
1,717,145	+				-0.1
1,717,146	-				+0.9
1,717,166	+				-2.2
1,717,166	+				-4.7
1,717,167	-				-1.2
1,717,167	-				+0.2
1,717,167	-				+0.5
1,717,188	+				-0.9
1,717,189	-				+0.5
1,717,189	-				-0.4
1,717,189	-				-1.7
1,717,270	-				+0.5
1,717,351	-				+0.1
1,717,351	-				+0.9