Strain Fitness in Pseudomonas putida KT2440 around PP_0293

Experiment: PUT 8 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PUT 8 MOI 1
351,396	-		PP_0291	0.65	+0.5
351,396	-		PP_0291	0.65	+0.6
351,398	+		PP_0291	0.66	+1.6
351,398	+		PP_0291	0.66	-0.4
351,399	-		PP_0291	0.66	+0.1
351,399	-		PP_0291	0.66	+0.5
351,399	-		PP_0291	0.66	-2.7
351,399	-		PP_0291	0.66	+2.2
351,499	+				-3.1
351,499	+				-1.1
351,523	+				-1.2
351,524	-				+1.3
351,590	-		PP_0292	0.10	-0.1
351,791	+		PP_0292	0.37	+0.7
351,792	-		PP_0292	0.38	+1.1
351,792	-		PP_0292	0.38	-3.5
351,792	-		PP_0292	0.38	-0.3
351,812	+				-0.6
351,813	-		PP_0292	0.40	-1.5
351,813	-		PP_0292	0.40	-0.2
352,193	+				-1.4
352,193	+				-4.0
352,194	-				+0.6
352,194	-				+0.1
352,194	-				+2.2
352,194	-				+0.1
352,241	+				-0.2
352,242	-				-0.5
352,242	-				-3.1
352,242	-				+1.0
352,242	-				-4.0
352,242	-				-1.7
352,242	-				-3.7
352,457	+		PP_0293	0.25	-3.8
352,457	+		PP_0293	0.25	-2.5
352,457	+		PP_0293	0.25	-0.9
352,977	+				-3.2
352,977	+				+0.9
352,978	-				-3.4
353,001	+				+0.8
353,002	-				+0.1
353,002	-				-1.1
353,427	-		PP_0294	0.23	+0.6
353,519	+		PP_0294	0.31	-0.4
353,542	+		PP_0294	0.33	+0.4
353,542	+		PP_0294	0.33	-4.1
353,543	-		PP_0294	0.33	+1.8
353,543	-		PP_0294	0.33	+1.3
353,618	+		PP_0294	0.40	-3.0
353,618	+		PP_0294	0.40	-0.7