Experiment: Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03320 and PS417_03325 are separated by 122 nucleotides PS417_03325 and PS417_03330 are separated by 261 nucleotides
PS417_03320: PS417_03320 - hypothetical protein, at 759,550 to 760,719
_03320
PS417_03325: PS417_03325 - acid phosphatase, at 760,842 to 762,542
_03325
PS417_03330: PS417_03330 - Short chain fatty acid transporter, at 762,804 to 764,222
_03330
Position (kb) 760
761
762
763 Strain fitness (log2 ratio) -1
0
1 at 759.858 kb on - strand, within PS417_03320 at 759.858 kb on - strand, within PS417_03320 at 759.879 kb on - strand, within PS417_03320 at 760.076 kb on + strand, within PS417_03320 at 760.088 kb on + strand, within PS417_03320 at 760.266 kb on - strand, within PS417_03320 at 760.344 kb on + strand, within PS417_03320 at 760.344 kb on + strand, within PS417_03320 at 760.345 kb on - strand, within PS417_03320 at 760.346 kb on + strand, within PS417_03320 at 760.538 kb on + strand, within PS417_03320 at 760.719 kb on + strand at 760.719 kb on + strand at 760.806 kb on + strand at 760.987 kb on + strand at 761.249 kb on - strand, within PS417_03325 at 761.384 kb on - strand, within PS417_03325 at 761.611 kb on + strand, within PS417_03325 at 761.821 kb on + strand, within PS417_03325 at 761.821 kb on + strand, within PS417_03325 at 761.822 kb on - strand, within PS417_03325 at 761.822 kb on - strand, within PS417_03325 at 762.013 kb on + strand, within PS417_03325 at 762.086 kb on - strand, within PS417_03325 at 762.113 kb on - strand, within PS417_03325 at 762.510 kb on + strand at 762.634 kb on + strand at 762.656 kb on + strand at 762.727 kb on - strand at 762.727 kb on - strand at 762.852 kb on + strand at 762.955 kb on + strand, within PS417_03330 at 762.956 kb on - strand, within PS417_03330 at 762.956 kb on - strand, within PS417_03330 at 762.956 kb on - strand, within PS417_03330 at 762.956 kb on - strand, within PS417_03330 at 762.997 kb on + strand, within PS417_03330 at 763.025 kb on - strand, within PS417_03330 at 763.054 kb on + strand, within PS417_03330 at 763.055 kb on - strand, within PS417_03330 at 763.055 kb on - strand, within PS417_03330 at 763.117 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.139 kb on - strand, within PS417_03330 at 763.139 kb on - strand, within PS417_03330 at 763.178 kb on + strand, within PS417_03330 at 763.179 kb on - strand, within PS417_03330 at 763.179 kb on - strand, within PS417_03330 at 763.179 kb on - strand, within PS417_03330
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 759,858 - PS417_03320 0.26 +0.3 759,858 - PS417_03320 0.26 -0.9 759,879 - PS417_03320 0.28 -0.0 760,076 + PS417_03320 0.45 +0.5 760,088 + PS417_03320 0.46 +0.1 760,266 - PS417_03320 0.61 -0.8 760,344 + PS417_03320 0.68 +0.3 760,344 + PS417_03320 0.68 +0.1 760,345 - PS417_03320 0.68 +0.7 760,346 + PS417_03320 0.68 +0.9 760,538 + PS417_03320 0.84 +0.1 760,719 + +0.5 760,719 + +0.2 760,806 + -0.0 760,987 + -0.1 761,249 - PS417_03325 0.24 +0.2 761,384 - PS417_03325 0.32 -1.3 761,611 + PS417_03325 0.45 -0.2 761,821 + PS417_03325 0.58 -1.0 761,821 + PS417_03325 0.58 -0.2 761,822 - PS417_03325 0.58 -1.2 761,822 - PS417_03325 0.58 -0.6 762,013 + PS417_03325 0.69 -0.3 762,086 - PS417_03325 0.73 -0.6 762,113 - PS417_03325 0.75 -0.5 762,510 + -0.1 762,634 + +0.6 762,656 + -0.0 762,727 - -0.5 762,727 - +0.3 762,852 + +0.4 762,955 + PS417_03330 0.11 -1.4 762,956 - PS417_03330 0.11 -0.2 762,956 - PS417_03330 0.11 -1.0 762,956 - PS417_03330 0.11 +0.5 762,956 - PS417_03330 0.11 -0.0 762,997 + PS417_03330 0.14 +0.4 763,025 - PS417_03330 0.16 +1.1 763,054 + PS417_03330 0.18 +0.4 763,055 - PS417_03330 0.18 +0.3 763,055 - PS417_03330 0.18 +0.5 763,117 + PS417_03330 0.22 +0.2 763,138 + PS417_03330 0.24 -0.2 763,138 + PS417_03330 0.24 -0.9 763,138 + PS417_03330 0.24 +0.4 763,138 + PS417_03330 0.24 +0.4 763,138 + PS417_03330 0.24 +0.7 763,139 - PS417_03330 0.24 +0.1 763,139 - PS417_03330 0.24 -0.5 763,178 + PS417_03330 0.26 -0.4 763,179 - PS417_03330 0.26 -0.7 763,179 - PS417_03330 0.26 +0.4 763,179 - PS417_03330 0.26 -0.3
Or see this region's nucleotide sequence