Experiment: LB outgrowth control more dilute start
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0693 and PP_0694 overlap by 4 nucleotides PP_0694 and PP_0695 overlap by 11 nucleotides
PP_0693: PP_0693 - conserved protein of unknown function, at 804,498 to 807,329
_0693
PP_0694: PP_0694 - conserved protein of unknown function, at 807,326 to 808,033
_0694
PP_0695: PP_0695 - conserved protein of unknown function, at 808,023 to 809,357
_0695
Position (kb) 807
808
809 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 806.366 kb on + strand, within PP_0693 at 806.367 kb on - strand, within PP_0693 at 806.488 kb on + strand, within PP_0693 at 806.489 kb on - strand, within PP_0693 at 806.489 kb on - strand, within PP_0693 at 806.489 kb on - strand, within PP_0693 at 806.489 kb on - strand, within PP_0693 at 806.620 kb on + strand, within PP_0693 at 806.621 kb on - strand, within PP_0693 at 806.621 kb on - strand, within PP_0693 at 806.621 kb on - strand, within PP_0693 at 806.640 kb on + strand, within PP_0693 at 806.640 kb on + strand, within PP_0693 at 806.641 kb on - strand, within PP_0693 at 806.675 kb on - strand, within PP_0693 at 806.899 kb on + strand, within PP_0693 at 806.900 kb on - strand, within PP_0693 at 806.900 kb on - strand, within PP_0693 at 806.998 kb on + strand, within PP_0693 at 806.998 kb on + strand, within PP_0693 at 806.998 kb on + strand, within PP_0693 at 806.999 kb on - strand, within PP_0693 at 807.094 kb on + strand at 807.095 kb on - strand at 807.095 kb on - strand at 807.095 kb on - strand at 807.115 kb on + strand at 807.142 kb on + strand at 807.142 kb on + strand at 807.143 kb on - strand at 807.143 kb on - strand at 807.143 kb on - strand at 807.143 kb on - strand at 807.213 kb on - strand at 807.232 kb on + strand at 807.232 kb on + strand at 807.314 kb on - strand at 807.573 kb on + strand, within PP_0694 at 807.573 kb on + strand, within PP_0694 at 807.573 kb on + strand, within PP_0694 at 807.681 kb on + strand, within PP_0694 at 807.681 kb on + strand, within PP_0694 at 807.849 kb on + strand, within PP_0694 at 807.849 kb on + strand, within PP_0694 at 807.850 kb on - strand, within PP_0694 at 807.853 kb on - strand, within PP_0694 at 807.939 kb on + strand, within PP_0694 at 807.940 kb on - strand, within PP_0694 at 807.940 kb on - strand, within PP_0694 at 808.058 kb on + strand at 808.136 kb on - strand at 808.198 kb on + strand, within PP_0695 at 808.199 kb on - strand, within PP_0695 at 808.199 kb on - strand, within PP_0695 at 808.390 kb on + strand, within PP_0695 at 808.391 kb on - strand, within PP_0695 at 808.396 kb on + strand, within PP_0695 at 808.719 kb on + strand, within PP_0695 at 808.719 kb on + strand, within PP_0695 at 808.719 kb on + strand, within PP_0695 at 808.720 kb on - strand, within PP_0695 at 808.774 kb on + strand, within PP_0695 at 808.775 kb on - strand, within PP_0695 at 808.805 kb on - strand, within PP_0695
Per-strain Table
Position Strand Gene LocusTag Fraction LB outgrowth control more dilute start remove 806,366 + PP_0693 0.66 -0.9 806,367 - PP_0693 0.66 -1.5 806,488 + PP_0693 0.70 -0.0 806,489 - PP_0693 0.70 -0.1 806,489 - PP_0693 0.70 -0.7 806,489 - PP_0693 0.70 -0.3 806,489 - PP_0693 0.70 -1.7 806,620 + PP_0693 0.75 +0.7 806,621 - PP_0693 0.75 -0.2 806,621 - PP_0693 0.75 +1.0 806,621 - PP_0693 0.75 +0.0 806,640 + PP_0693 0.76 +0.1 806,640 + PP_0693 0.76 +0.5 806,641 - PP_0693 0.76 -0.1 806,675 - PP_0693 0.77 -1.4 806,899 + PP_0693 0.85 -0.3 806,900 - PP_0693 0.85 -2.9 806,900 - PP_0693 0.85 -0.1 806,998 + PP_0693 0.88 +0.3 806,998 + PP_0693 0.88 -0.7 806,998 + PP_0693 0.88 -0.1 806,999 - PP_0693 0.88 -1.2 807,094 + -1.3 807,095 - -0.1 807,095 - -0.2 807,095 - +0.5 807,115 + -0.7 807,142 + -0.7 807,142 + -0.7 807,143 - -0.9 807,143 - -0.3 807,143 - +1.6 807,143 - +0.4 807,213 - +0.3 807,232 + +0.3 807,232 + +0.5 807,314 - +0.5 807,573 + PP_0694 0.35 -0.4 807,573 + PP_0694 0.35 +0.9 807,573 + PP_0694 0.35 +0.2 807,681 + PP_0694 0.50 -0.0 807,681 + PP_0694 0.50 +1.1 807,849 + PP_0694 0.74 +0.9 807,849 + PP_0694 0.74 +1.4 807,850 - PP_0694 0.74 +0.5 807,853 - PP_0694 0.74 +0.2 807,939 + PP_0694 0.87 +0.5 807,940 - PP_0694 0.87 +0.2 807,940 - PP_0694 0.87 -0.4 808,058 + +0.2 808,136 - -0.6 808,198 + PP_0695 0.13 +0.1 808,199 - PP_0695 0.13 +0.3 808,199 - PP_0695 0.13 -0.3 808,390 + PP_0695 0.27 +0.0 808,391 - PP_0695 0.28 -0.7 808,396 + PP_0695 0.28 +0.2 808,719 + PP_0695 0.52 +0.8 808,719 + PP_0695 0.52 +1.6 808,719 + PP_0695 0.52 +0.3 808,720 - PP_0695 0.52 -0.7 808,774 + PP_0695 0.56 -0.7 808,775 - PP_0695 0.56 -0.7 808,805 - PP_0695 0.59 +0.2
Or see this region's nucleotide sequence