Experiment: Scopoletin 3 mM; liquid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22930 and PS417_22935 are separated by 12 nucleotides PS417_22935 and PS417_22940 are separated by 355 nucleotides
PS417_22930: PS417_22930 - cytochrome C assembly protein, at 4,967,482 to 4,968,294
_22930
PS417_22935: PS417_22935 - hypothetical protein, at 4,968,307 to 4,969,545
_22935
PS417_22940: PS417_22940 - MFS transporter, at 4,969,901 to 4,971,214
_22940
Position (kb)
4968
4969
4970 Strain fitness (log2 ratio)
-2
-1
0
1 at 4968.610 kb on + strand, within PS417_22935 at 4968.610 kb on + strand, within PS417_22935 at 4969.105 kb on + strand, within PS417_22935 at 4969.106 kb on - strand, within PS417_22935 at 4969.106 kb on - strand, within PS417_22935 at 4969.309 kb on + strand, within PS417_22935 at 4969.642 kb on + strand at 4969.642 kb on + strand at 4969.642 kb on + strand at 4969.643 kb on - strand at 4969.643 kb on - strand at 4969.643 kb on - strand at 4969.643 kb on - strand at 4969.643 kb on - strand at 4969.643 kb on - strand at 4969.643 kb on - strand at 4969.643 kb on - strand at 4969.643 kb on - strand at 4969.662 kb on - strand at 4969.662 kb on - strand at 4969.690 kb on + strand at 4969.690 kb on + strand at 4969.690 kb on + strand at 4969.690 kb on + strand at 4969.691 kb on - strand at 4969.691 kb on - strand at 4969.691 kb on - strand at 4969.691 kb on - strand at 4969.691 kb on - strand at 4969.708 kb on + strand at 4969.708 kb on + strand at 4969.709 kb on - strand at 4969.709 kb on - strand at 4969.709 kb on - strand at 4969.711 kb on - strand at 4969.859 kb on + strand at 4969.859 kb on + strand at 4969.898 kb on - strand at 4969.913 kb on + strand at 4969.913 kb on + strand at 4969.914 kb on - strand at 4969.914 kb on - strand at 4970.001 kb on - strand at 4970.009 kb on + strand at 4970.009 kb on + strand at 4970.009 kb on + strand at 4970.010 kb on - strand at 4970.010 kb on - strand at 4970.010 kb on - strand at 4970.010 kb on - strand at 4970.011 kb on + strand at 4970.011 kb on + strand at 4970.012 kb on - strand at 4970.012 kb on - strand at 4970.016 kb on - strand at 4970.215 kb on + strand, within PS417_22940
Per-strain Table
Position Strand Gene LocusTag Fraction Scopoletin 3 mM; liquid stress remove 4,968,610 + PS417_22935 0.24 -0.2 4,968,610 + PS417_22935 0.24 -0.2 4,969,105 + PS417_22935 0.64 -1.6 4,969,106 - PS417_22935 0.64 -0.1 4,969,106 - PS417_22935 0.64 +0.2 4,969,309 + PS417_22935 0.81 -1.4 4,969,642 + -0.4 4,969,642 + +0.4 4,969,642 + -0.7 4,969,643 - +0.5 4,969,643 - -0.4 4,969,643 - +0.8 4,969,643 - -0.7 4,969,643 - +1.4 4,969,643 - -0.3 4,969,643 - +0.7 4,969,643 - +0.7 4,969,643 - -0.5 4,969,662 - -0.3 4,969,662 - +1.0 4,969,690 + +0.4 4,969,690 + -0.8 4,969,690 + -0.4 4,969,690 + -0.0 4,969,691 - -1.4 4,969,691 - +0.2 4,969,691 - -0.3 4,969,691 - +0.4 4,969,691 - -0.0 4,969,708 + -0.4 4,969,708 + +0.1 4,969,709 - -0.7 4,969,709 - +0.9 4,969,709 - +0.4 4,969,711 - -0.5 4,969,859 + +0.8 4,969,859 + -2.1 4,969,898 - -1.3 4,969,913 + -0.6 4,969,913 + +0.0 4,969,914 - -0.2 4,969,914 - -1.3 4,970,001 - +1.4 4,970,009 + -1.3 4,970,009 + +0.9 4,970,009 + -0.2 4,970,010 - -1.5 4,970,010 - +0.4 4,970,010 - -1.2 4,970,010 - -1.0 4,970,011 + +0.7 4,970,011 + +1.1 4,970,012 - -0.1 4,970,012 - -0.2 4,970,016 - -0.1 4,970,215 + PS417_22940 0.24 -0.3
Or see this region's nucleotide sequence