Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02535 and PS417_02540 are separated by 152 nucleotides PS417_02540 and PS417_02545 are separated by 152 nucleotides PS417_02545 and PS417_02550 are separated by 152 nucleotides PS417_02550 and PS417_02555 are separated by 225 nucleotides PS417_02555 and PS417_02560 overlap by 4 nucleotides
PS417_02535: PS417_02535 - tRNA-Leu, at 580,923 to 581,009
_02535
PS417_02540: PS417_02540 - tRNA-Leu, at 581,162 to 581,248
_02540
PS417_02545: PS417_02545 - tRNA-Leu, at 581,401 to 581,487
_02545
PS417_02550: PS417_02550 - tRNA-Leu, at 581,640 to 581,726
_02550
PS417_02555: PS417_02555 - exoribonuclease R, at 581,952 to 584,579
_02555
PS417_02560: PS417_02560 - 23S rRNA methyltransferase, at 584,576 to 585,331
_02560
Position (kb) 581
582
583
584
585 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3
4 at 581.765 kb on - strand at 581.767 kb on - strand at 581.781 kb on - strand at 581.867 kb on + strand at 581.868 kb on - strand at 581.909 kb on + strand at 581.919 kb on + strand at 581.919 kb on + strand at 581.930 kb on + strand at 581.931 kb on - strand at 581.931 kb on - strand at 581.931 kb on - strand at 581.931 kb on - strand at 581.931 kb on - strand at 582.171 kb on + strand at 582.171 kb on + strand at 582.171 kb on + strand at 582.171 kb on + strand at 582.171 kb on + strand at 582.172 kb on - strand at 582.172 kb on - strand at 582.172 kb on - strand at 582.189 kb on + strand at 582.189 kb on + strand at 582.398 kb on - strand, within PS417_02555 at 582.429 kb on + strand, within PS417_02555 at 582.429 kb on + strand, within PS417_02555 at 582.509 kb on + strand, within PS417_02555 at 582.612 kb on + strand, within PS417_02555 at 582.612 kb on + strand, within PS417_02555 at 582.612 kb on + strand, within PS417_02555 at 582.612 kb on + strand, within PS417_02555 at 582.612 kb on + strand, within PS417_02555 at 582.613 kb on - strand, within PS417_02555 at 582.613 kb on - strand, within PS417_02555 at 582.613 kb on - strand, within PS417_02555 at 582.613 kb on - strand, within PS417_02555 at 582.654 kb on + strand, within PS417_02555 at 582.654 kb on + strand, within PS417_02555 at 582.654 kb on + strand, within PS417_02555 at 582.654 kb on + strand, within PS417_02555 at 582.654 kb on + strand, within PS417_02555 at 582.655 kb on - strand, within PS417_02555 at 582.655 kb on - strand, within PS417_02555 at 582.895 kb on - strand, within PS417_02555 at 582.935 kb on - strand, within PS417_02555 at 582.951 kb on + strand, within PS417_02555 at 582.951 kb on + strand, within PS417_02555 at 583.092 kb on + strand, within PS417_02555 at 583.092 kb on + strand, within PS417_02555 at 583.128 kb on + strand, within PS417_02555 at 583.194 kb on + strand, within PS417_02555 at 583.194 kb on + strand, within PS417_02555 at 583.194 kb on + strand, within PS417_02555 at 583.216 kb on + strand, within PS417_02555 at 583.217 kb on - strand, within PS417_02555 at 583.217 kb on - strand, within PS417_02555 at 583.237 kb on - strand, within PS417_02555 at 583.399 kb on + strand, within PS417_02555 at 583.443 kb on + strand, within PS417_02555 at 583.443 kb on + strand, within PS417_02555 at 583.444 kb on - strand, within PS417_02555 at 583.444 kb on - strand, within PS417_02555 at 583.444 kb on - strand, within PS417_02555 at 583.641 kb on + strand, within PS417_02555 at 583.686 kb on + strand, within PS417_02555 at 583.686 kb on + strand, within PS417_02555 at 583.687 kb on - strand, within PS417_02555 at 583.687 kb on - strand, within PS417_02555 at 583.687 kb on - strand, within PS417_02555 at 583.687 kb on - strand, within PS417_02555 at 583.697 kb on + strand, within PS417_02555 at 583.697 kb on + strand, within PS417_02555 at 583.697 kb on + strand, within PS417_02555 at 583.697 kb on + strand, within PS417_02555 at 583.698 kb on - strand, within PS417_02555 at 583.698 kb on - strand, within PS417_02555 at 583.824 kb on + strand, within PS417_02555 at 583.830 kb on + strand, within PS417_02555 at 584.019 kb on + strand, within PS417_02555 at 584.019 kb on + strand, within PS417_02555 at 584.019 kb on + strand, within PS417_02555 at 584.019 kb on + strand, within PS417_02555 at 584.019 kb on + strand, within PS417_02555 at 584.020 kb on - strand, within PS417_02555 at 584.061 kb on + strand, within PS417_02555 at 584.061 kb on + strand, within PS417_02555 at 584.061 kb on + strand, within PS417_02555 at 584.062 kb on - strand, within PS417_02555 at 584.064 kb on + strand, within PS417_02555 at 584.065 kb on - strand, within PS417_02555 at 584.065 kb on - strand, within PS417_02555 at 584.441 kb on + strand at 584.496 kb on - strand at 584.610 kb on + strand at 584.758 kb on - strand, within PS417_02560 at 585.125 kb on + strand, within PS417_02560 at 585.126 kb on - strand, within PS417_02560 at 585.126 kb on - strand, within PS417_02560 at 585.330 kb on - strand at 585.388 kb on + strand at 585.463 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 581,765 - +0.5 581,767 - +1.0 581,781 - +0.7 581,867 + -1.2 581,868 - -0.5 581,909 + -0.6 581,919 + -3.1 581,919 + -1.8 581,930 + +1.4 581,931 - +0.3 581,931 - -1.1 581,931 - -0.7 581,931 - -1.0 581,931 - -0.1 582,171 + -1.4 582,171 + -0.3 582,171 + +1.7 582,171 + +0.4 582,171 + -4.0 582,172 - +1.1 582,172 - +2.3 582,172 - +2.7 582,189 + -6.2 582,189 + -1.3 582,398 - PS417_02555 0.17 +1.3 582,429 + PS417_02555 0.18 -0.4 582,429 + PS417_02555 0.18 +0.8 582,509 + PS417_02555 0.21 +1.3 582,612 + PS417_02555 0.25 +1.4 582,612 + PS417_02555 0.25 -1.8 582,612 + PS417_02555 0.25 +1.1 582,612 + PS417_02555 0.25 +1.9 582,612 + PS417_02555 0.25 -0.9 582,613 - PS417_02555 0.25 -0.1 582,613 - PS417_02555 0.25 -1.2 582,613 - PS417_02555 0.25 +1.9 582,613 - PS417_02555 0.25 -0.9 582,654 + PS417_02555 0.27 +1.7 582,654 + PS417_02555 0.27 -1.4 582,654 + PS417_02555 0.27 +1.9 582,654 + PS417_02555 0.27 -0.3 582,654 + PS417_02555 0.27 -2.1 582,655 - PS417_02555 0.27 +1.7 582,655 - PS417_02555 0.27 +0.0 582,895 - PS417_02555 0.36 +3.3 582,935 - PS417_02555 0.37 +0.0 582,951 + PS417_02555 0.38 +0.0 582,951 + PS417_02555 0.38 +0.9 583,092 + PS417_02555 0.43 -0.1 583,092 + PS417_02555 0.43 -0.7 583,128 + PS417_02555 0.45 +0.9 583,194 + PS417_02555 0.47 +0.8 583,194 + PS417_02555 0.47 -1.5 583,194 + PS417_02555 0.47 +1.1 583,216 + PS417_02555 0.48 -3.0 583,217 - PS417_02555 0.48 +2.3 583,217 - PS417_02555 0.48 +1.7 583,237 - PS417_02555 0.49 -1.1 583,399 + PS417_02555 0.55 +1.7 583,443 + PS417_02555 0.57 +1.7 583,443 + PS417_02555 0.57 -1.8 583,444 - PS417_02555 0.57 +1.7 583,444 - PS417_02555 0.57 +1.3 583,444 - PS417_02555 0.57 +1.1 583,641 + PS417_02555 0.64 -0.1 583,686 + PS417_02555 0.66 +1.7 583,686 + PS417_02555 0.66 +0.9 583,687 - PS417_02555 0.66 +0.8 583,687 - PS417_02555 0.66 +0.2 583,687 - PS417_02555 0.66 +4.3 583,687 - PS417_02555 0.66 -1.4 583,697 + PS417_02555 0.66 +3.3 583,697 + PS417_02555 0.66 +0.8 583,697 + PS417_02555 0.66 -1.6 583,697 + PS417_02555 0.66 +3.3 583,698 - PS417_02555 0.66 -0.7 583,698 - PS417_02555 0.66 +4.3 583,824 + PS417_02555 0.71 -1.3 583,830 + PS417_02555 0.71 -1.3 584,019 + PS417_02555 0.79 -1.8 584,019 + PS417_02555 0.79 -3.1 584,019 + PS417_02555 0.79 -4.7 584,019 + PS417_02555 0.79 -4.0 584,019 + PS417_02555 0.79 -4.2 584,020 - PS417_02555 0.79 -4.6 584,061 + PS417_02555 0.80 +0.9 584,061 + PS417_02555 0.80 -1.8 584,061 + PS417_02555 0.80 -1.6 584,062 - PS417_02555 0.80 -1.5 584,064 + PS417_02555 0.80 -0.7 584,065 - PS417_02555 0.80 -0.7 584,065 - PS417_02555 0.80 -0.3 584,441 + +0.1 584,496 - +0.8 584,610 + +0.9 584,758 - PS417_02560 0.24 +1.9 585,125 + PS417_02560 0.73 +2.7 585,126 - PS417_02560 0.73 -0.4 585,126 - PS417_02560 0.73 +1.9 585,330 - -0.8 585,388 + +0.9 585,463 + -0.3
Or see this region's nucleotide sequence