Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_24715 and PS417_24720 are separated by 17 nucleotides PS417_24720 and PS417_24725 overlap by 11 nucleotides
PS417_24715: PS417_24715 - lytic transglycosylase, at 5,362,045 to 5,363,055
_24715
PS417_24720: PS417_24720 - rod shape-determining protein RodA, at 5,363,073 to 5,364,218
_24720
PS417_24725: PS417_24725 - penicillin-binding protein 2, at 5,364,208 to 5,366,106
_24725
Position (kb)
5363
5364
5365 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5362.104 kb on - strand at 5362.104 kb on - strand at 5362.104 kb on - strand at 5362.104 kb on - strand at 5362.120 kb on - strand at 5362.122 kb on - strand at 5362.122 kb on - strand at 5362.206 kb on + strand, within PS417_24715 at 5362.207 kb on - strand, within PS417_24715 at 5362.207 kb on - strand, within PS417_24715 at 5362.207 kb on - strand, within PS417_24715 at 5362.370 kb on + strand, within PS417_24715 at 5362.370 kb on + strand, within PS417_24715 at 5362.413 kb on + strand, within PS417_24715 at 5362.413 kb on + strand, within PS417_24715 at 5362.414 kb on - strand at 5362.414 kb on - strand, within PS417_24715 at 5362.414 kb on - strand, within PS417_24715 at 5362.419 kb on + strand, within PS417_24715 at 5362.420 kb on - strand, within PS417_24715 at 5362.420 kb on - strand, within PS417_24715 at 5362.800 kb on - strand, within PS417_24715 at 5362.961 kb on + strand at 5362.961 kb on + strand at 5362.962 kb on - strand at 5362.962 kb on - strand at 5363.047 kb on + strand at 5363.048 kb on - strand at 5363.048 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 5,362,104 - +0.4 5,362,104 - +0.9 5,362,104 - +0.2 5,362,104 - +1.1 5,362,120 - +0.2 5,362,122 - +0.3 5,362,122 - +0.2 5,362,206 + PS417_24715 0.16 -0.3 5,362,207 - PS417_24715 0.16 +0.6 5,362,207 - PS417_24715 0.16 +0.1 5,362,207 - PS417_24715 0.16 +0.3 5,362,370 + PS417_24715 0.32 +0.3 5,362,370 + PS417_24715 0.32 +0.0 5,362,413 + PS417_24715 0.36 +0.5 5,362,413 + PS417_24715 0.36 +2.0 5,362,414 - +0.5 5,362,414 - PS417_24715 0.36 +0.3 5,362,414 - PS417_24715 0.36 +1.3 5,362,419 + PS417_24715 0.37 +1.0 5,362,420 - PS417_24715 0.37 -1.8 5,362,420 - PS417_24715 0.37 +0.6 5,362,800 - PS417_24715 0.75 +0.3 5,362,961 + +0.2 5,362,961 + +0.7 5,362,962 - +0.9 5,362,962 - +0.3 5,363,047 + +0.0 5,363,048 - +1.9 5,363,048 - -0.8
Or see this region's nucleotide sequence