Experiment: Fraxetin 3 mM; solid stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23295 and PS417_23300 are separated by 127 nucleotides PS417_23300 and PS417_23305 are separated by 291 nucleotides PS417_23305 and PS417_23310 are separated by 42 nucleotides PS417_23310 and PS417_23315 are separated by 209 nucleotides
PS417_23295: PS417_23295 - lysine transporter LysE, at 5,043,741 to 5,044,376
_23295
PS417_23300: PS417_23300 - hypothetical protein, at 5,044,504 to 5,044,875
_23300
PS417_23305: PS417_23305 - cytochrome C, at 5,045,167 to 5,045,544
_23305
PS417_23310: PS417_23310 - glyoxalase, at 5,045,587 to 5,046,018
_23310
PS417_23315: PS417_23315 - transcriptional regulator, at 5,046,228 to 5,046,608
_23315
Position (kb) 5045
5046 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5044.214 kb on + strand, within PS417_23295 at 5044.214 kb on + strand, within PS417_23295 at 5044.214 kb on + strand, within PS417_23295 at 5044.214 kb on + strand, within PS417_23295 at 5044.214 kb on + strand, within PS417_23295 at 5044.214 kb on + strand, within PS417_23295 at 5044.215 kb on - strand, within PS417_23295 at 5044.215 kb on - strand, within PS417_23295 at 5044.216 kb on + strand, within PS417_23295 at 5044.216 kb on + strand, within PS417_23295 at 5044.216 kb on + strand, within PS417_23295 at 5044.216 kb on + strand, within PS417_23295 at 5044.216 kb on + strand, within PS417_23295 at 5044.216 kb on + strand, within PS417_23295 at 5044.216 kb on + strand, within PS417_23295 at 5044.297 kb on + strand, within PS417_23295 at 5044.298 kb on - strand, within PS417_23295 at 5044.298 kb on - strand at 5044.348 kb on + strand at 5044.349 kb on - strand at 5044.415 kb on + strand at 5044.415 kb on + strand at 5044.416 kb on - strand at 5044.416 kb on - strand at 5044.416 kb on - strand at 5044.460 kb on + strand at 5044.460 kb on + strand at 5044.461 kb on - strand at 5044.484 kb on + strand at 5044.484 kb on + strand at 5044.484 kb on + strand at 5044.485 kb on - strand at 5044.485 kb on - strand at 5044.609 kb on + strand, within PS417_23300 at 5044.609 kb on + strand, within PS417_23300 at 5044.610 kb on - strand, within PS417_23300 at 5044.610 kb on - strand, within PS417_23300 at 5044.638 kb on + strand, within PS417_23300 at 5044.639 kb on - strand, within PS417_23300 at 5044.711 kb on + strand, within PS417_23300 at 5044.729 kb on + strand, within PS417_23300 at 5044.730 kb on - strand, within PS417_23300 at 5044.924 kb on - strand at 5045.080 kb on + strand at 5045.080 kb on + strand at 5045.135 kb on - strand at 5045.135 kb on - strand at 5045.209 kb on + strand, within PS417_23305 at 5045.209 kb on + strand, within PS417_23305 at 5045.209 kb on + strand, within PS417_23305 at 5045.209 kb on + strand, within PS417_23305 at 5045.210 kb on - strand, within PS417_23305 at 5045.210 kb on - strand, within PS417_23305 at 5045.210 kb on - strand, within PS417_23305 at 5045.210 kb on - strand, within PS417_23305 at 5045.210 kb on - strand, within PS417_23305 at 5045.210 kb on - strand, within PS417_23305 at 5045.261 kb on - strand, within PS417_23305 at 5045.282 kb on + strand, within PS417_23305 at 5045.283 kb on - strand, within PS417_23305 at 5045.346 kb on - strand, within PS417_23305 at 5045.346 kb on - strand, within PS417_23305 at 5045.448 kb on + strand, within PS417_23305 at 5045.455 kb on + strand, within PS417_23305 at 5045.456 kb on - strand, within PS417_23305 at 5045.588 kb on + strand at 5045.588 kb on + strand at 5045.589 kb on - strand at 5045.589 kb on - strand at 5045.598 kb on + strand at 5045.598 kb on + strand at 5045.598 kb on + strand at 5045.599 kb on - strand at 5045.855 kb on + strand, within PS417_23310 at 5045.856 kb on - strand, within PS417_23310 at 5045.856 kb on - strand, within PS417_23310 at 5045.856 kb on - strand, within PS417_23310 at 5046.018 kb on + strand at 5046.019 kb on - strand at 5046.019 kb on - strand at 5046.019 kb on - strand at 5046.136 kb on + strand at 5046.137 kb on - strand at 5046.137 kb on - strand at 5046.137 kb on - strand at 5046.189 kb on + strand at 5046.189 kb on + strand at 5046.200 kb on + strand at 5046.200 kb on + strand at 5046.200 kb on + strand at 5046.200 kb on + strand at 5046.200 kb on + strand at 5046.201 kb on - strand at 5046.351 kb on + strand, within PS417_23315 at 5046.489 kb on - strand, within PS417_23315
Per-strain Table
Position Strand Gene LocusTag Fraction Fraxetin 3 mM; solid stress remove 5,044,214 + PS417_23295 0.74 +0.2 5,044,214 + PS417_23295 0.74 +1.0 5,044,214 + PS417_23295 0.74 -0.6 5,044,214 + PS417_23295 0.74 -1.5 5,044,214 + PS417_23295 0.74 +0.4 5,044,214 + PS417_23295 0.74 -0.5 5,044,215 - PS417_23295 0.75 -0.3 5,044,215 - PS417_23295 0.75 +1.1 5,044,216 + PS417_23295 0.75 +3.1 5,044,216 + PS417_23295 0.75 -0.2 5,044,216 + PS417_23295 0.75 +0.6 5,044,216 + PS417_23295 0.75 -0.8 5,044,216 + PS417_23295 0.75 +0.1 5,044,216 + PS417_23295 0.75 +0.6 5,044,216 + PS417_23295 0.75 -0.2 5,044,297 + PS417_23295 0.87 -0.9 5,044,298 - PS417_23295 0.88 +0.1 5,044,298 - +2.0 5,044,348 + -0.6 5,044,349 - +0.2 5,044,415 + +2.3 5,044,415 + -0.3 5,044,416 - +1.0 5,044,416 - -0.7 5,044,416 - +0.1 5,044,460 + -0.3 5,044,460 + -0.1 5,044,461 - +0.0 5,044,484 + +0.0 5,044,484 + +0.7 5,044,484 + -0.1 5,044,485 - -0.0 5,044,485 - -0.9 5,044,609 + PS417_23300 0.28 -0.4 5,044,609 + PS417_23300 0.28 -1.3 5,044,610 - PS417_23300 0.28 +0.4 5,044,610 - PS417_23300 0.28 +0.2 5,044,638 + PS417_23300 0.36 +0.5 5,044,639 - PS417_23300 0.36 +1.6 5,044,711 + PS417_23300 0.56 -0.5 5,044,729 + PS417_23300 0.60 +1.2 5,044,730 - PS417_23300 0.61 +0.4 5,044,924 - -0.2 5,045,080 + -0.2 5,045,080 + +0.9 5,045,135 - +1.4 5,045,135 - +0.3 5,045,209 + PS417_23305 0.11 +0.1 5,045,209 + PS417_23305 0.11 +0.1 5,045,209 + PS417_23305 0.11 -0.1 5,045,209 + PS417_23305 0.11 +0.5 5,045,210 - PS417_23305 0.11 +1.8 5,045,210 - PS417_23305 0.11 +1.3 5,045,210 - PS417_23305 0.11 +1.6 5,045,210 - PS417_23305 0.11 -0.3 5,045,210 - PS417_23305 0.11 +0.3 5,045,210 - PS417_23305 0.11 -0.4 5,045,261 - PS417_23305 0.25 +1.0 5,045,282 + PS417_23305 0.30 +1.2 5,045,283 - PS417_23305 0.31 -0.9 5,045,346 - PS417_23305 0.47 -0.5 5,045,346 - PS417_23305 0.47 -0.2 5,045,448 + PS417_23305 0.74 +0.3 5,045,455 + PS417_23305 0.76 -0.4 5,045,456 - PS417_23305 0.76 -0.1 5,045,588 + -0.2 5,045,588 + -0.2 5,045,589 - -1.3 5,045,589 - +1.0 5,045,598 + +1.0 5,045,598 + +1.1 5,045,598 + +0.2 5,045,599 - +1.4 5,045,855 + PS417_23310 0.62 -0.3 5,045,856 - PS417_23310 0.62 +0.2 5,045,856 - PS417_23310 0.62 -0.5 5,045,856 - PS417_23310 0.62 -1.0 5,046,018 + +4.3 5,046,019 - -1.3 5,046,019 - -0.2 5,046,019 - +1.4 5,046,136 + -1.3 5,046,137 - +1.3 5,046,137 - -0.7 5,046,137 - -2.5 5,046,189 + -2.1 5,046,189 + -0.0 5,046,200 + -1.6 5,046,200 + -1.0 5,046,200 + +1.0 5,046,200 + -0.9 5,046,200 + -0.9 5,046,201 - +0.4 5,046,351 + PS417_23315 0.32 -0.2 5,046,489 - PS417_23315 0.69 +0.7
Or see this region's nucleotide sequence